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pfa5 palmitoyltransferase Pfa5 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 3361262, updated on 18-Sep-2024

Summary

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Official Symbol
pfa5
Official Full Name
palmitoyltransferase Pfa5
Primary source
PomBase:SPBC691.01
Locus tag
SPOM_SPBC691.01
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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See pfa5 in Genome Data Viewer
Location:
chromosome: II
Exon count:
6
Sequence:
Chromosome: II; NC_003423.3 (1420346..1421900)

Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene deoxyribonuclease Tat-D Neighboring gene lipoate-protein ligase A Neighboring gene peroxin pas4 Neighboring gene ncRNA Neighboring gene RINT1 family protein Neighboring gene AP-2 adaptor complex subunit Alp3 Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003423.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Protein S-palmitoylation regulates different stages of meiosis in Schizosaccharomyces pombe. Pham TV, et al. Life Sci Alliance, 2023 Apr. PMID 36650056, Free PMC Article
  2. Phosphorylation of the RNA-binding protein Zfs1 modulates sexual differentiation in fission yeast. Navarro FJ, et al. J Cell Sci, 2017 Dec 15. PMID 29084823, Free PMC Article
  3. Hierarchical modularity and the evolution of genetic interactomes across species. Ryan CJ, et al. Mol Cell, 2012 Jun 8. PMID 22681890, Free PMC Article
  4. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372
  5. Transcription and RNA-processing in fission yeast mitochondria. Schäfer B, et al. RNA, 2005 May. PMID 15811919, Free PMC Article

See all (10) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables protein-cysteine S-palmitoyltransferase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in protein targeting to membrane IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in vacuole fusion, non-autophagic ISO
Inferred from Sequence Orthology
more info
  
Component Evidence Code Pubs
is_active_in Golgi apparatus HDA PubMed 
is_active_in Golgi apparatus IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in cytoplasm HDA PubMed 
is_active_in endoplasmic reticulum IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in fungal-type vacuole IDA
Inferred from Direct Assay
more info
 PubMed 
is_active_in fungal-type vacuole membrane HDA PubMed 

General protein information

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Preferred Names
palmitoyltransferase Pfa5

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003423.3 Reference assembly

    Range
    1420346..1421900
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001021489.4 → NP_001018794.2  palmitoyltransferase Pfa5 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_001018794.2

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O13627, Q9C0W9, Q9UUE9
    Conserved Domains (1) summary
    COG5273
    Location:9 → 283
    COG5273; Uncharacterized protein containing DHHC-type Zn finger [General function prediction only]
Nucleotide Protein
Heading Accession and Version

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