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rtn1 reticulon Rtn1 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 3361269, updated on 18-Sep-2024

Summary

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Official Symbol
rtn1
Official Full Name
reticulon Rtn1
Primary source
PomBase:SPBC31A8.01c
Locus tag
SPOM_SPBC31A8.01C
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
Also known as
cwl1; SPBC651.13c
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Genomic context

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See rtn1 in Genome Data Viewer
Location:
chromosome: II
Exon count:
1
Sequence:
Chromosome: II; NC_003423.3 (1262298..1263604, complement)

Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene AP-3 adaptor complex subunit Apm3 Neighboring gene ncRNA Neighboring gene protein dbl7 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003423.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The cortical ER network limits the permissive zone for actomyosin ring assembly. Zhang D, et al. Curr Biol, 2010 Jun 8. PMID 20434336
  2. Characterization of cwl1+, a gene from Schizosaccharomyces pombe whose overexpression causes cell lysis. Godoy C, et al. Yeast, 1996 Aug. PMID 8873452
  3. Plasma membrane tethering of the cortical ER necessitates its finely reticulated architecture. Zhang D, et al. Curr Biol, 2012 Nov 6. PMID 23041194
  4. Posttranslational Arginylation Enzyme Arginyltransferase1 Shows Genetic Interactions With Specific Cellular Pathways in vivo. Wiley DJ, et al. Front Physiol, 2020. PMID 32435206, Free PMC Article
  5. Expanded Interactome of the Intrinsically Disordered Protein Dss1. Schenstrøm SM, et al. Cell Rep, 2018 Oct 23. PMID 30355493, Free PMC Article

See all (13) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables membrane bending activity TAS
Traceable Author Statement
more info
 PubMed 
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
enables sphingolipid binding TAS
Traceable Author Statement
more info
 PubMed 
Process Evidence Code Pubs
involved_in endoplasmic reticulum tubular network membrane organization IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in endoplasmic reticulum tubular network organization EXP
Inferred from Experiment
more info
 PubMed 
Component Evidence Code Pubs
is_active_in cell division site IDA
Inferred from Direct Assay
more info
 PubMed 
is_active_in cortical endoplasmic reticulum IDA
Inferred from Direct Assay
more info
 PubMed 
is_active_in endoplasmic reticulum tubular network membrane EXP
Inferred from Experiment
more info
 PubMed 

General protein information

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Preferred Names
reticulon Rtn1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003423.3 Reference assembly

    Range
    1262298..1263604 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001021421.4 → NP_001018789.2  reticulon Rtn1 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_001018789.2

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    P53694
    Conserved Domains (1) summary
    pfam02453
    Location:130 → 285
    Reticulon; Reticulon
Nucleotide Protein
Heading Accession and Version

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