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pop8 RNase P and RNase MRP subunit Pop8 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 3361273, updated on 18-Sep-2024

Summary

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Official Symbol
pop8
Official Full Name
RNase P and RNase MRP subunit Pop8
Primary source
PomBase:SPBC1709.20
Locus tag
SPOM_SPBC1709.20
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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See pop8 in Genome Data Viewer
Location:
chromosome: II
Exon count:
3
Sequence:
Chromosome: II; NC_003423.3 (1112697..1113159)

Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene tRNA dihydrouridine synthase Dus2 Neighboring gene ncRNA Neighboring gene 3-keto sterol reductase Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene mRNA processing protein Cft1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003423.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. RNase MRP cleaves pre-tRNASer-Met in the tRNA maturation pathway. Saito Y, et al. PLoS One, 2014. PMID 25401760, Free PMC Article
  2. A Proteome-wide Fission Yeast Interactome Reveals Network Evolution Principles from Yeasts to Human. Vo TV, et al. Cell, 2016 Jan 14. PMID 26771498, Free PMC Article
  3. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372
  4. The genome sequence of Schizosaccharomyces pombe. Wood V, et al. Nature, 2002 Feb 21. PMID 11859360
  5. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
contributes_to ribonuclease MRP activity EXP
Inferred from Experiment
more info
 PubMed 
contributes_to ribonuclease MRP activity IBA
Inferred from Biological aspect of Ancestor
more info
  
contributes_to ribonuclease P activity IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IDA
Inferred from Direct Assay
more info
 PubMed 
involved_in intronic box C/D snoRNA processing IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in nuclear-transcribed mRNA catabolic process, RNase MRP-dependent IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in tRNA processing IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in tRNA processing IDA
Inferred from Direct Assay
more info
 PubMed 
Component Evidence Code Pubs
is_active_in cytosol HDA PubMed 
part_of nucleolar ribonuclease P complex IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in nucleus HDA PubMed 
part_of ribonuclease MRP complex EXP
Inferred from Experiment
more info
 PubMed 
part_of ribonuclease MRP complex IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
RNase P and RNase MRP subunit Pop8

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003423.3 Reference assembly

    Range
    1112697..1113159
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001021349.2 → NP_001018786.1  RNase P and RNase MRP subunit Pop8 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_001018786.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q7Z996
    Conserved Domains (1) summary
    cl00605
    Location:13 → 98
    RNase_P_Rpp14; Rpp14/Pop5 family
Nucleotide Protein
Heading Accession and Version

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