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sos7 protein sos7 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 3361402, updated on 18-Sep-2024

Summary

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Official Symbol
sos7
Official Full Name
protein sos7
Primary source
PomBase:SPAPB17E12.06
Locus tag
SPOM_SPAPB17E12.06
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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See sos7 in Genome Data Viewer
Location:
chromosome: I
Exon count:
6
Sequence:
Chromosome: I; NC_003424.3 (1276494..1279000)

Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene ubiquitin-protein ligase E3 Neighboring gene COP9/signalosome complex subunit Csn2 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene 60S ribosomal protein eL37 Neighboring gene tRNA-splicing endonuclease catalytic subunit Sen2 Neighboring gene uncharacterized protein Neighboring gene N-glycosylation protein Neighboring gene 2' O-ribose methyltransferase Mrm2-like protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003424.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sos7, an essential component of the conserved Schizosaccharomyces pombe Ndc80-MIND-Spc7 complex, identifies a new family of fungal kinetochore proteins. Jakopec V, et al. Mol Cell Biol, 2012 Aug. PMID 22711988, Free PMC Article
  2. Transcription and RNA-processing in fission yeast mitochondria. Schäfer B, et al. RNA, 2005 May. PMID 15811919, Free PMC Article
  3. The genome sequence of Schizosaccharomyces pombe. Wood V, et al. Nature, 2002 Feb 21. PMID 11859360
  4. The mitochondrial genome of the fission yeast Schizosaccharomyces pombe: highly homologous introns are inserted at the same position of the otherwise less conserved cox1 genes in Schizosaccharomyces pombe and Aspergillus nidulans. Lang BF. EMBO J, 1984 Sep. PMID 6092057, Free PMC Article
  5. The mitochondrial genome of the fission yeast Schizosaccharomyces pombe. The cytochrome b gene has an intron closely related to the first two introns in the Saccharomyces cerevisiae cox1 gene. Lang BF, et al. J Mol Biol, 1985 Aug 5. PMID 4046021

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in attachment of mitotic spindle microtubules to kinetochore IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in attachment of mitotic spindle microtubules to kinetochore IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in homologous chromosome orientation in meiotic metaphase I ISS
Inferred from Sequence or Structural Similarity
more info
  
involved_in mitotic sister chromatid segregation IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in protein localization to kinetochore IEA
Inferred from Electronic Annotation
more info
  
involved_in regulation of meiosis I spindle assembly checkpoint ISS
Inferred from Sequence or Structural Similarity
more info
  
involved_in spindle attachment to meiosis I kinetochore IC
Inferred by Curator
more info
  
Component Evidence Code Pubs
part_of Knl1/Spc105 complex ISS
Inferred from Sequence or Structural Similarity
more info
  
is_active_in kinetochore IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in kinetochore IDA
Inferred from Direct Assay
more info
 PubMed 
is_active_in kinetochore IPI
Inferred from Physical Interaction
more info
 PubMed 
NOT is_active_in mitotic spindle pole body IDA
Inferred from Direct Assay
more info
 PubMed 
is_active_in nucleus IC
Inferred by Curator
more info
  

General protein information

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Preferred Names
protein sos7

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003424.3 Reference assembly

    Range
    1276494..1279000
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001356006.2 → NP_001343031.1  protein sos7 [Schizosaccharomyces pombe]

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    U3H042
    Conserved Domains (1) summary
    cl25732
    Location:95 → 246
    SMC_N; RecF/RecN/SMC N terminal domain
Nucleotide Protein
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