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mud1 UBA domain protein Mud1 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 3361477, updated on 22-Jun-2024

Summary

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Gene symbol
mud1
Gene description
UBA domain protein Mud1
Locus tag
SPOM_SPAC56F8.08
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
Also known as
ddi1; ucp1
Old locus tag
SPAC56F8.08
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Genomic context

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See mud1 in Genome Data Viewer
Location:
chromosome: I
Exon count:
2
Sequence:
Chromosome: I; NC_003424.3 (1139094..1140325)

Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene dolichyl-phosphate-glucose--glycolipid alpha-glucosyltransferase Alg10 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene protein ema19 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene rRNA methyltransferase Rrp8 Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003424.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Mechanism of Lys48-linked polyubiquitin chain recognition by the Mud1 UBA domain. Trempe JF, et al. EMBO J, 2005 Sep 21. PMID 16138082, Free PMC Article
  2. Click synthesis of ubiquitin dimer analogs to interrogate linkage-specific UBA domain binding. Weikart ND, et al. Chem Commun (Camb), 2012 Jan 7. PMID 22095407
  3. UBA domain containing proteins in fission yeast. Hartmann-Petersen R, et al. Int J Biochem Cell Biol, 2003 May. PMID 12672455
  4. BIM(EL), an intrinsically disordered protein, is degraded by 20S proteasomes in the absence of poly-ubiquitylation. Wiggins CM, et al. J Cell Sci, 2011 Mar 15. PMID 21378313
  5. Proteins containing the UBA domain are able to bind to multi-ubiquitin chains. Wilkinson CR, et al. Nat Cell Biol, 2001 Oct. PMID 11584278

See all (8) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables K48-linked polyubiquitin modification-dependent protein binding IDA
Inferred from Direct Assay
more info
 PubMed 
enables SNARE binding ISO
Inferred from Sequence Orthology
more info
  
enables aspartic-type endopeptidase activity IEA
Inferred from Electronic Annotation
more info
  
enables polyubiquitin modification-dependent protein binding IDA
Inferred from Direct Assay
more info
 PubMed 
enables ubiquitin binding IDA
Inferred from Direct Assay
more info
 PubMed 
Process Evidence Code Pubs
involved_in proteasome-mediated ubiquitin-dependent protein catabolic process TAS
Traceable Author Statement
more info
 PubMed 
involved_in regulation of exocytosis ISO
Inferred from Sequence Orthology
more info
  
Component Evidence Code Pubs
is_active_in plasma membrane ISO
Inferred from Sequence Orthology
more info
  

General protein information

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Preferred Names
UBA domain protein Mud1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003424.3 Reference assembly

    Range
    1139094..1140325
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001018619.3 → NP_001018195.1  UBA domain protein Mud1 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_001018195.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q10256
    Conserved Domains (2) summary
    pfam09668
    Location:87 → 210
    Asp_protease; Aspartyl protease
    cd14308
    Location:297 → 332
    UBA_Mud1_like; UBA domain found in Schizosaccharomyces pombe UBA domain-containing protein mud1 and similar proteins
Nucleotide Protein
Heading Accession and Version

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