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Tc00.1047053507063.90 mitochondrial DNA polymerase beta, putative [ Trypanosoma cruzi ]

Gene ID: 3552516, updated on 23-Nov-2023

Summary

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Gene symbol
Tc00.1047053507063.90
Gene description
mitochondrial DNA polymerase beta, putative
Locus tag
Tc00.1047053507063.90
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Trypanosoma cruzi (strain: CL Brener)
Lineage
Eukaryota; Discoba; Euglenozoa; Kinetoplastea; Metakinetoplastina; Trypanosomatida; Trypanosomatidae; Trypanosoma; Schizotrypanum
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Genomic context

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See Tc00.1047053507063.90 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
1

NW_001849561.1Genomic Context describing neighboring genes Neighboring gene trans-sialidase, putative Neighboring gene hypothetical protein Neighboring gene mitochondrial DNA polymerase beta-PAK, putative Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_001849561.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Cloning and characterization of a DNA polymerase beta gene from Trypanosoma cruzi. Venegas JA, et al. Parasitol Int, 2009 Jun. PMID 19567232
  2. The genome sequence of Trypanosoma cruzi, etiologic agent of Chagas disease. El-Sayed NM, et al. Science, 2005 Jul 15. PMID 16020725
  3. Comparative genomics of trypanosomatid parasitic protozoa. El-Sayed NM, et al. Science, 2005 Jul 15. PMID 16020724
  4. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  5. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

  • heterozygous, non-Esmeraldo-like haplotype
    allele of Tc00.1047053503955.20

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA-directed DNA polymerase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in double-strand break repair via nonhomologous end joining IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mitochondrial DNA polymerase beta, putative
XP_819968.1
  • heterozygous, non-Esmeraldo-like haplotype
    allele of Tc00.1047053503955.20

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_001849561.1 Reference assembly

    Range
    375842..377053 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_814875.1 → XP_819968.1  mitochondrial DNA polymerase beta, putative [Trypanosoma cruzi]

    See identical proteins and their annotated locations for XP_819968.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A2V2VAG8, C4NXS6, Q4E024, V5BGW3
    Conserved Domains (1) summary
    smart00483
    Location:15 → 402
    POLXc; DNA polymerase X family
Nucleotide Protein
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