U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Tc00.1047053507063.100 mitochondrial DNA polymerase beta-PAK, putative [ Trypanosoma cruzi ]

Gene ID: 3552517, updated on 23-Nov-2023

Summary

Go to the top of the page Help
Gene symbol
Tc00.1047053507063.100
Gene description
mitochondrial DNA polymerase beta-PAK, putative
Locus tag
Tc00.1047053507063.100
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Trypanosoma cruzi (strain: CL Brener)
Lineage
Eukaryota; Discoba; Euglenozoa; Kinetoplastea; Metakinetoplastina; Trypanosomatida; Trypanosomatidae; Trypanosoma; Schizotrypanum
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See Tc00.1047053507063.100 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
1

NW_001849561.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene mitochondrial DNA polymerase beta, putative Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_001849561.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. The genome sequence of Trypanosoma cruzi, etiologic agent of Chagas disease. El-Sayed NM, et al. Science, 2005 Jul 15. PMID 16020725
  2. Comparative genomics of trypanosomatid parasitic protozoa. El-Sayed NM, et al. Science, 2005 Jul 15. PMID 16020724
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

  • heterozygous, non-Esmeraldo-like haplotype
    allele of Tc00.1047053503955.10

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA-directed DNA polymerase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in double-strand break repair via nonhomologous end joining IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
mitochondrial DNA polymerase beta-PAK, putative
XP_819969.1
  • heterozygous, non-Esmeraldo-like haplotype
    allele of Tc00.1047053503955.10

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_001849561.1 Reference assembly

    Range
    377918..379807 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_814876.1 → XP_819969.1  mitochondrial DNA polymerase beta-PAK, putative [Trypanosoma cruzi]

    See identical proteins and their annotated locations for XP_819969.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A2V2VZ30, Q4E023
    Conserved Domains (2) summary
    cd00141
    Location:102 → 475
    NT_POLXc; Nucleotidyltransferase (NT) domain of family X DNA Polymerases
    smart00483
    Location:99 → 475
    POLXc; DNA polymerase X family
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials