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Tc00.1047053508461.60 synaptojanin (N-terminal domain), putative [ Trypanosoma cruzi ]

Gene ID: 3554597, updated on 29-Oct-2024

Summary

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Gene symbol
Tc00.1047053508461.60
Gene description
synaptojanin (N-terminal domain), putative
Locus tag
Tc00.1047053508461.60
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Trypanosoma cruzi (strain: CL Brener)
Lineage
Eukaryota; Discoba; Euglenozoa; Kinetoplastea; Metakinetoplastina; Trypanosomatida; Trypanosomatidae; Trypanosoma; Schizotrypanum
Orthologs
Trypanosoma brucei all
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Genomic context

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See Tc00.1047053508461.60 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
1

NW_001849577.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_001849577.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome sequence of Trypanosoma cruzi, etiologic agent of Chagas disease. El-Sayed NM, et al. Science, 2005 Jul 15. PMID 16020725
  2. Comparative genomics of trypanosomatid parasitic protozoa. El-Sayed NM, et al. Science, 2005 Jul 15. PMID 16020724
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

  • heterozygous, non-Esmeraldo-like haplotype
    allele of Tc00.1047053506147.30

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol-4-phosphate phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phosphatidylinositol dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
synaptojanin (N-terminal domain), putative
XP_821667.1
  • heterozygous, non-Esmeraldo-like haplotype
    allele of Tc00.1047053506147.30

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_001849577.1 Reference assembly

    Range
    197470..199638 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_816574.1 → XP_821667.1  synaptojanin (N-terminal domain), putative [Trypanosoma cruzi]

    See identical proteins and their annotated locations for XP_821667.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A2V2W1P1, A0A2V2XNG7, Q4E4V9, V5BXV9
    Conserved Domains (1) summary
    pfam02383
    Location:72 → 432
    Syja_N; SacI homology domain
Nucleotide Protein
Heading Accession and Version

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