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Tc00.1047053508461.480 60S ribosomal protein L23, putative [ Trypanosoma cruzi ]

Gene ID: 3554602, updated on 23-Nov-2023

Summary

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Gene symbol
Tc00.1047053508461.480
Gene description
60S ribosomal protein L23, putative
Locus tag
Tc00.1047053508461.480
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Trypanosoma cruzi (strain: CL Brener)
Lineage
Eukaryota; Discoba; Euglenozoa; Kinetoplastea; Metakinetoplastina; Trypanosomatida; Trypanosomatidae; Trypanosoma; Schizotrypanum
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Genomic context

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See Tc00.1047053508461.480 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
1

NW_001849577.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene 60S ribosomal protein L23, putative Neighboring gene 60S ribosomal protein L27A/L29, putative

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_001849577.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome sequence of Trypanosoma cruzi, etiologic agent of Chagas disease. El-Sayed NM, et al. Science, 2005 Jul 15. PMID 16020725
  2. Comparative genomics of trypanosomatid parasitic protozoa. El-Sayed NM, et al. Science, 2005 Jul 15. PMID 16020724
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

  • homozygous allele located in a merged assembly of Esmeraldo and non-Esmeraldo homologous sequences or a repetitive gene whose different copies were merged during the assembly.

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables large ribosomal subunit rRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of cytosolic large ribosomal subunit IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
60S ribosomal protein L23, putative
XP_821640.1
  • homozygous allele located in a merged assembly of Esmeraldo and non-Esmeraldo homologous sequences or a repetitive gene whose different copies were merged during the assembly.

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_001849577.1 Reference assembly

    Range
    304731..305150
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_816547.1 → XP_821640.1  60S ribosomal protein L23, putative [Trypanosoma cruzi]

    See identical proteins and their annotated locations for XP_821640.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q94776
    UniProtKB/TrEMBL
    A0A2V2W1J5, Q4E4R1
    Conserved Domains (1) summary
    PTZ00054
    Location:1 → 139
    PTZ00054; 60S ribosomal protein L23; Provisional
Nucleotide Protein
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