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Tc00.1047053508461.410 t-complex protein 1, eta subunit, putative [ Trypanosoma cruzi ]

Gene ID: 3554611, updated on 29-Oct-2024

Summary

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Gene symbol
Tc00.1047053508461.410
Gene description
t-complex protein 1, eta subunit, putative
Locus tag
Tc00.1047053508461.410
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Trypanosoma cruzi (strain: CL Brener)
Lineage
Eukaryota; Discoba; Euglenozoa; Kinetoplastea; Metakinetoplastina; Trypanosomatida; Trypanosomatidae; Trypanosoma; Schizotrypanum
Orthologs
Trypanosoma brucei all
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Genomic context

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See Tc00.1047053508461.410 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
1

NW_001849577.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene nucleoside diphosphate kinase, putative Neighboring gene 30S ribosomal protein S17, putative Neighboring gene proteasome beta 2 subunit, putative

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_001849577.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome sequence of Trypanosoma cruzi, etiologic agent of Chagas disease. El-Sayed NM, et al. Science, 2005 Jul 15. PMID 16020725
  2. Comparative genomics of trypanosomatid parasitic protozoa. El-Sayed NM, et al. Science, 2005 Jul 15. PMID 16020724
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

  • homozygous allele located in a merged assembly of Esmeraldo and non-Esmeraldo homologous sequences or a repetitive gene whose different copies were merged during the assembly.

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP-dependent protein folding chaperone IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables unfolded protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein folding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of chaperonin-containing T-complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
t-complex protein 1, eta subunit, putative
XP_821633.1
  • homozygous allele located in a merged assembly of Esmeraldo and non-Esmeraldo homologous sequences or a repetitive gene whose different copies were merged during the assembly.

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_001849577.1 Reference assembly

    Range
    293418..295124
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_816540.1 → XP_821633.1  t-complex protein 1, eta subunit, putative [Trypanosoma cruzi]

    See identical proteins and their annotated locations for XP_821633.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A7J6YHJ3, Q4E4R8
    Conserved Domains (2) summary
    cd03340
    Location:5 → 526
    TCP1_eta; TCP-1 (CTT or eukaryotic type II) chaperonin family, eta subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), ...
    TIGR02345
    Location:3 → 526
    chap_CCT_eta; T-complex protein 1, eta subunit
Nucleotide Protein
Heading Accession and Version

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