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spat-2 Protein lilliputian;Suppressor of PAr-Two defect [ Caenorhabditis elegans ]

Gene ID: 3564779, updated on 17-Oct-2024

Summary

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Official Symbol
spat-2
Official Full Name
Protein lilliputian;Suppressor of PAr-Two defect
Primary source
WormBase:WBGene00012973
Locus tag
CELE_Y48A6B.13
See related
AllianceGenome:WB:WBGene00012973
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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Genomic context

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See spat-2 in Genome Data Viewer
Location:
chromosome: III
Exon count:
18
Sequence:
Chromosome: III; NC_003281.10 (11036943..11063027)

Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene NR LBD domain-containing protein Neighboring gene Enoyl-[acyl-carrier-protein] reductase, mitochondrial Neighboring gene Regulator of spindle assembly protein 2 Neighboring gene ncRNA Neighboring gene tRNA-Pro Neighboring gene tRNA-Pro

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003281.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A genomewide screen for suppressors of par-2 uncovers potential regulators of PAR protein-dependent cell polarity in Caenorhabditis elegans. Labbé JC, et al. Genetics, 2006 Sep. PMID 16816419, Free PMC Article
  2. The protein tyrosine phosphatase PPH-7 is required for fertility and embryonic development in C. elegans at elevated temperatures. Franziscus CA, et al. FEBS Open Bio, 2024 Mar. PMID 38320757, Free PMC Article
  3. The Caenorhabditis elegans RDE-10/RDE-11 complex regulates RNAi by promoting secondary siRNA amplification. Zhang C, et al. Curr Biol, 2012 May 22. PMID 22542102, Free PMC Article
  4. Depletion of endogenously biotinylated carboxylases enhances the sensitivity of TurboID-mediated proximity labeling in Caenorhabditis elegans. Artan M, et al. J Biol Chem, 2022 Sep. PMID 35933017, Free PMC Article
  5. Interactome analysis of Caenorhabditis elegans synapses by TurboID-based proximity labeling. Artan M, et al. J Biol Chem, 2021 Sep. PMID 34416233, Free PMC Article

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

General protein information

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Preferred Names
Protein lilliputian;Suppressor of PAr-Two defect
NP_001255101.1
  • Confirmed by transcript evidence
NP_001255105.1
  • Confirmed by transcript evidence
NP_001334218.1
  • Confirmed by transcript evidence
NP_001366652.1
  • Confirmed by transcript evidence
NP_001367286.1
  • Confirmed by transcript evidence
NP_001367287.1
  • Confirmed by transcript evidence
NP_001368618.1
  • Partially confirmed by transcript evidence
NP_001368619.1
  • Confirmed by transcript evidence
NP_001380201.1
  • Confirmed by transcript evidence
NP_001391167.1
  • Confirmed by transcript evidence
NP_001391168.1
  • Confirmed by transcript evidence
NP_001391171.1
  • Confirmed by transcript evidence
NP_001391173.1
  • Confirmed by transcript evidence
NP_001391174.1
  • Confirmed by transcript evidence
NP_001391175.1
  • Confirmed by transcript evidence
NP_001391176.1
  • Confirmed by transcript evidence
NP_001408263.1
  • Confirmed by transcript evidence
NP_001408264.1
  • Confirmed by transcript evidence
NP_001408265.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003281.10 Reference assembly

    Range
    11036943..11063027
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001392210.1 → NP_001380201.1  Protein lilliputian [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1I6CM86

  2. NM_001347290.2 → NP_001334218.1  Protein lilliputian [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1I6CM87

  3. NM_001379922.2 → NP_001368618.1  Protein lilliputian [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1I6CM95

  4. NM_001404167.1 → NP_001391171.1  Suppressor of PAr-Two defect [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A8S4Q9K5

  5. NM_001421332.1 → NP_001408265.1  Suppressor of PAr-Two defect [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A8S4QB06

  6. NM_001421333.1 → NP_001408263.1  Suppressor of PAr-Two defect [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A8S4QCI7

  7. NM_001421334.1 → NP_001408264.1  Suppressor of PAr-Two defect [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A8S4QGN0

  8. NM_001404171.1 → NP_001391167.1  Suppressor of PAr-Two defect [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A8S4QDB3

  9. NM_001404172.1 → NP_001391168.1  Suppressor of PAr-Two defect [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A8S4QBZ3

  10. NM_001404173.1 → NP_001391173.1  Suppressor of PAr-Two defect [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A8S4QFE0

  11. NM_001404174.1 → NP_001391174.1  Suppressor of PAr-Two defect [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A8S4QD83

  12. NM_001379923.2 → NP_001368619.1  Protein lilliputian [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1I6CM84

  13. NM_001268172.3 → NP_001255101.1  Protein lilliputian [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001255101.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    F3Y5Q7

  14. NM_001404176.1 → NP_001391176.1  Suppressor of PAr-Two defect [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A8S4QBD3

  15. NM_001404175.1 → NP_001391175.1  Suppressor of PAr-Two defect [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A8S4QBY0

  16. NM_001379924.1 → NP_001367286.1  Protein lilliputian [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    F3Y5Q3

  17. NM_001379926.1 → NP_001366652.1  Protein lilliputian [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9XXC7

  18. NM_001379927.1 → NP_001367287.1  Protein lilliputian [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    F3Y5Q4

  19. NM_001268176.3 → NP_001255105.1  Protein lilliputian [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001255105.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    F3Y5Q5

RNA

  1. NR_144561.1 RNA Sequence

    Status: REVIEWED

Nucleotide Protein
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