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pals-23 Protein containing ALS2cr12 (ALS2CR12) signature [ Caenorhabditis elegans ]

Gene ID: 3565025, updated on 2-Nov-2024

Summary

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Official Symbol
pals-23
Official Full Name
Protein containing ALS2cr12 (ALS2CR12) signature
Primary source
WormBase:WBGene00016218
Locus tag
CELE_C29F9.3
See related
AllianceGenome:WB:WBGene00016218
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Involved in innate immune response. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See pals-23 in Genome Data Viewer
Location:
chromosome: III
Exon count:
7
Sequence:
Chromosome: III; NC_003281.10 (124778..127971)

Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene histone acetyltransferase Neighboring gene DUF4200 domain-containing protein Neighboring gene Uncharacterized protein Neighboring gene Nuclear Hormone Receptor family Neighboring gene Uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003281.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Multiple pals gene modules control a balance between immunity and development in Caenorhabditis elegans. Lažetić V, et al. PLoS Pathog, 2023 Jul. PMID 37463170, Free PMC Article
  2. A conserved role for a GATA transcription factor in regulating epithelial innate immune responses. Shapira M, et al. Proc Natl Acad Sci U S A, 2006 Sep 19. PMID 16968778, Free PMC Article
  3. Screening for cold tolerance genes in C. elegans, whose expressions are affected by anticancer drugs camptothecin and leptomycin B. Okahata M, et al. Sci Rep, 2024 Mar 5. PMID 38443452, Free PMC Article
  4. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Gene Ontology Provided by WormBase

Process Evidence Code Pubs
involved_in innate immune response HEP PubMed 

General protein information

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Preferred Names
Protein containing ALS2cr12 (ALS2CR12) signature
NP_001370514.1
  • Product from WormBase gene class pals;
    Confirmed by transcript evidence
NP_001379740.1
  • Product from WormBase gene class pals;
    Confirmed by transcript evidence
NP_741063.1
  • Product from WormBase gene class pals;
    Partially confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003281.10 Reference assembly

    Range
    124778..127971
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001384001.1 → NP_001370514.1  Protein containing ALS2cr12 (ALS2CR12) signature [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    H2KZ33

  2. NM_001393245.1 → NP_001379740.1  Protein containing ALS2cr12 (ALS2CR12) signature [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q8MNX2

  3. NM_171857.5 → NP_741063.1  Protein containing ALS2cr12 (ALS2CR12) signature [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_741063.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    H2KZ34
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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