U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

C41D11.3 Cysteine/serine-rich nuclear protein N-terminal domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 3565087, updated on 2-Nov-2024

Summary

Go to the top of the page Help
Official Symbol
C41D11.3
Official Full Name
Cysteine/serine-rich nuclear protein N-terminal domain-containing protein
Primary source
WormBase:WBGene00016562
Locus tag
CELE_C41D11.3
See related
AllianceGenome:WB:WBGene00016562
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be active in nucleus. Is expressed in amphid neurons; body wall musculature; pharyngeal muscle cell; and uterine muscle. Orthologous to several human genes including CSRNP3 (cysteine and serine rich nuclear protein 3). [provided by Alliance of Genome Resources, Nov 2024]
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See C41D11.3 in Genome Data Viewer
Location:
chromosome: I
Exon count:
12
Sequence:
Chromosome: I; NC_003279.8 (4428457..4444348, complement)

Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene DH domain-containing protein Neighboring gene Guided entry of tail-anchored proteins factor 1 Neighboring gene Uncharacterized protein Neighboring gene Eukaryotic translation initiation factor 3 subunit H Neighboring gene Endonuclease G, mitochondrial Neighboring gene TM2 domain-containing protein C41D11.9

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_003279.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IBA
Inferred from Biological aspect of Ancestor
more info
  
enables sequence-specific DNA binding IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in nucleus IEA
Inferred from Electronic Annotation
more info
  

General protein information

Go to the top of the page Help
Preferred Names
Cysteine/serine-rich nuclear protein N-terminal domain-containing protein
NP_001293389.1
  • Confirmed by transcript evidence
NP_001367499.1
  • Confirmed by transcript evidence
NP_001368494.1
  • Confirmed by transcript evidence
NP_001370421.1
  • Partially confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003279.8 Reference assembly

    Range
    4428457..4444348 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001379804.3 → NP_001367499.1  Cysteine/serine-rich nuclear protein N-terminal domain-containing protein [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    B3KLZ9
    Conserved Domains (1) summary
    pfam16019
    Location:174 → 363
    CSRNP_N; Cysteine/serine-rich nuclear protein N-terminus

  2. NM_001379803.2 → NP_001368494.1  Cysteine/serine-rich nuclear protein N-terminal domain-containing protein [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A078BS72
    Conserved Domains (1) summary
    pfam16019
    Location:563 → 752
    CSRNP_N; Cysteine/serine-rich nuclear protein N-terminus

  3. NM_001306460.3 → NP_001293389.1  Cysteine/serine-rich nuclear protein N-terminal domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001293389.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A078BPM2
    Conserved Domains (1) summary
    pfam16019
    Location:562 → 750
    CSRNP_N; Cysteine/serine-rich nuclear protein N-terminus

  4. NM_001382924.1 → NP_001370421.1  Cysteine/serine-rich nuclear protein N-terminal domain-containing protein [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    H2KYQ1
    Conserved Domains (2) summary
    pfam16019
    Location:174 → 363
    CSRNP_N; Cysteine/serine-rich nuclear protein N-terminus
    NF033913
    Location:48 → 147
    fibronec_FbpA; LPXTG-anchored fibronectin-binding protein FbpA
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials
Tools