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nsph-4.2 Nematode Specific Peptide family [ Caenorhabditis elegans ]

Gene ID: 3565257, updated on 18-Sep-2024

Summary

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Official Symbol
nsph-4.2
Official Full Name
Nematode Specific Peptide family
Primary source
WormBase:WBGene00021993
Locus tag
CELE_Y59E9AL.3
See related
AllianceGenome:WB:WBGene00021993
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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Genomic context

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See nsph-4.2 in Genome Data Viewer
Location:
chromosome: IV
Exon count:
3
Sequence:
Chromosome: IV; NC_003282.8 (5218796..5220169)

Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene pseudo Neighboring gene BTB domain-containing protein Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003282.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. NHR-23 and SPE-44 regulate distinct sets of genes during Caenorhabditis elegans spermatogenesis. Ragle JM, et al. G3 (Bethesda), 2022 Nov 4. PMID 36135804, Free PMC Article
  2. EPIC: software toolkit for elution profile-based inference of protein complexes. Hu LZ, et al. Nat Methods, 2019 Aug. PMID 31308550, Free PMC Article
  3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

General protein information

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Preferred Names
Nematode Specific Peptide family
NP_001023537.1
  • Confirmed by transcript evidence;
    Product from WormBase gene class nsph

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003282.8 Reference assembly

    Range
    5218796..5220169
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001028366.6 → NP_001023537.1  Nematode Specific Peptide family [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001023537.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    G5ECF8
    Conserved Domains (1) summary
    pfam12150
    Location:11 → 374
    MFP2b; Cytosolic motility protein
Nucleotide Protein
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Molecular Biology Databases
Research Materials