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dnj-9 J domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 3565947, updated on 2-Nov-2024

Summary

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Official Symbol
dnj-9
Official Full Name
J domain-containing protein
Primary source
WormBase:WBGene00001027
Locus tag
CELE_F11G11.7
See related
AllianceGenome:WB:WBGene00001027
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be involved in cristae formation. Predicted to be located in mitochondrion. Is expressed in several structures, including body wall musculature; excretory cell; intestine; nervous system; and pharynx. Orthologous to human DNAJC11 (DnaJ heat shock protein family (Hsp40) member C11). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See dnj-9 in Genome Data Viewer
Location:
chromosome: II
Exon count:
7
Sequence:
Chromosome: II; NC_003280.10 (4852056..4857820)

Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene Nematode Specific Peptide family, group D Neighboring gene Neuropeptide-Like Protein Neighboring gene Membrane protein BRI3 Neighboring gene Nematode Specific Peptide family, group D

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003280.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. OWL1: an Arabidopsis J-domain protein involved in perception of very low light fluences. Kneissl J, et al. Plant Cell, 2009 Oct. PMID 19808946, Free PMC Article
  2. A modified TurboID approach identifies tissue-specific centriolar components in C. elegans. Holzer E, et al. PLoS Genet, 2022 Apr. PMID 35442950, Free PMC Article
  3. Amino acid and protein specificity of protein fatty acylation in C. elegans. Zhang B, et al. Proc Natl Acad Sci U S A, 2024 Jan 30. PMID 38252833, Free PMC Article
  4. EPIC: software toolkit for elution profile-based inference of protein complexes. Hu LZ, et al. Nat Methods, 2019 Aug. PMID 31308550, Free PMC Article
  5. OrthoList: a compendium of C. elegans genes with human orthologs. Shaye DD, et al. PLoS One, 2011. PMID 21647448, Free PMC Article

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Process Evidence Code Pubs
involved_in cristae formation IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
J domain-containing protein
NP_494872.2
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003280.10 Reference assembly

    Range
    4852056..4857820
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_062471.6 → NP_494872.2  J domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_494872.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    P91243
    Conserved Domains (2) summary
    pfam00226
    Location:26 → 91
    DnaJ; DnaJ domain
    pfam11875
    Location:417 → 555
    DUF3395; Domain of unknown function (DUF3395)
Nucleotide Protein
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