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Bahcc1 BAH domain and coiled-coil containing 1 [ Rattus norvegicus (Norway rat) ]

Gene ID: 360674, updated on 17-Aug-2024

Summary

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Official Symbol
Bahcc1provided by RGD
Official Full Name
BAH domain and coiled-coil containing 1provided by RGD
Primary source
RGD:1306500
See related
EnsemblRapid:ENSRNOG00000043102 AllianceGenome:RGD:1306500
Gene type
protein coding
RefSeq status
MODEL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
RGD1306500
Summary
Predicted to enable chromatin binding activity. Orthologous to human BAHCC1 (BAH domain and coiled-coil containing 1). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in Adrenal (RPKM 26.1), Kidney (RPKM 18.5) and 9 other tissues See more
Orthologs
human mouse all
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Genomic context

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See Bahcc1 in Genome Data Viewer
Location:
10q32.3
Exon count:
28
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 10 NC_086028.1 (106020534..106081698)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 10 NC_051345.1 (105526309..105583320)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 10 NC_005109.4 (109424306..109482305)

Chromosome 10 - NC_086028.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 38, member 10 Neighboring gene uncharacterized LOC100912167 Neighboring gene uncharacterized LOC120095309 Neighboring gene uncharacterized LOC102546528 Neighboring gene actin, gamma 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RGD

Function Evidence Code Pubs
enables chromatin binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within chromatin organization ISO
Inferred from Sequence Orthology
more info
  
acts_upstream_of_or_within locomotory behavior ISO
Inferred from Sequence Orthology
more info
  
acts_upstream_of_or_within neuron differentiation ISO
Inferred from Sequence Orthology
more info
  

General protein information

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Preferred Names
BAH and coiled-coil domain-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086028.1 Reference GRCr8

    Range
    106020534..106081698
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063270200.1 → XP_063126270.1  BAH and coiled-coil domain-containing protein 1 isoform X4

  2. XM_063270201.1 → XP_063126271.1  BAH and coiled-coil domain-containing protein 1 isoform X5

    Related
    ENSRNOP00000101258.1, ENSRNOT00000129994.1

  3. XM_063270199.1 → XP_063126269.1  BAH and coiled-coil domain-containing protein 1 isoform X3

    Related
    ENSRNOP00000103477.1, ENSRNOT00000156896.1

  4. XM_063270197.1 → XP_063126267.1  BAH and coiled-coil domain-containing protein 1 isoform X1

    UniProtKB/TrEMBL
    D3ZX10
    Related
    ENSRNOP00000063823.4, ENSRNOT00000066736.5

  5. XM_063270198.1 → XP_063126268.1  BAH and coiled-coil domain-containing protein 1 isoform X2

Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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Chemical Information
Molecular Biology Databases
Research Materials