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Rsrc2 arginine and serine rich coiled-coil 2 [ Rattus norvegicus (Norway rat) ]

Gene ID: 360807, updated on 17-Aug-2024

Summary

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Official Symbol
Rsrc2provided by RGD
Official Full Name
arginine and serine rich coiled-coil 2provided by RGD
Primary source
RGD:1564882
See related
EnsemblRapid:ENSRNOG00000001238 AllianceGenome:RGD:1564882
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Summary
Orthologous to human RSRC2 (arginine and serine rich coiled-coil 2). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in Thymus (RPKM 331.7), Spleen (RPKM 229.6) and 9 other tissues See more
Orthologs
human mouse all
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Genomic context

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Location:
12q16
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 12 NC_086030.1 (38500709..38520715)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 12 NC_051347.1 (32839840..32859820)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 12 NC_005111.4 (38274290..38294294)

Chromosome 12 - NC_086030.1Genomic Context describing neighboring genes Neighboring gene hydroxycarboxylic acid receptor 2 Neighboring gene kinetochore associated 1 Neighboring gene zinc finger CCHC-type containing 8 Neighboring gene protein S100-A11-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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Related articles in PubMed

  1. The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts. Baltz AG, et al. Mol Cell, 2012 Jun 8. PMID 22681889
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

General protein information

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Preferred Names
arginine/serine-rich coiled-coil protein 2
Names
arginine/serine-rich coiled-coil 2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001014128.2 → NP_001014150.1  arginine/serine-rich coiled-coil protein 2 isoform 1

    See identical proteins and their annotated locations for NP_001014150.1

    Status: VALIDATED

    Source sequence(s)
    JAXUCZ010000012
    UniProtKB/Swiss-Prot
    Q5PQR4
    Related
    ENSRNOP00000112419.1, ENSRNOT00000173736.1
    Conserved Domains (1) summary
    pfam15477
    Location:296 → 365
    SMAP; Small acidic protein family

  2. NM_001401170.1 → NP_001388099.1  arginine/serine-rich coiled-coil protein 2 isoform 2

    Status: VALIDATED

    Source sequence(s)
    JAXUCZ010000012
    Related
    ENSRNOP00000054602.4, ENSRNOT00000057788.5
    Conserved Domains (1) summary
    pfam15477
    Location:355 → 424
    SMAP; Small acidic protein family

  3. NM_001401171.1 → NP_001388100.1  arginine/serine-rich coiled-coil protein 2 isoform 3

    Status: VALIDATED

    Source sequence(s)
    JAXUCZ010000012
    Conserved Domains (1) summary
    pfam15477
    Location:354 → 423
    SMAP; Small acidic protein family

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086030.1 Reference GRCr8

    Range
    38500709..38520715
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006249341.4 → XP_006249403.1  arginine/serine-rich coiled-coil protein 2 isoform X1

    See identical proteins and their annotated locations for XP_006249403.1

    Related
    ENSRNOP00000070981.2, ENSRNOT00000087905.3
    Conserved Domains (1) summary
    pfam15477
    Location:295 → 364
    SMAP; Small acidic protein family

RNA

  1. XR_010056406.1 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q5PQR4.1 GenPept UniProtKB/Swiss-Prot:Q5PQR4

Gene LinkOut

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