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Glal gliadoralin-A like [ Rattus norvegicus (Norway rat) ]

Gene ID: 362451, updated on 2-Nov-2024

Summary

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Official Symbol
Glalprovided by RGD
Official Full Name
gliadoralin-A likeprovided by RGD
Primary source
RGD:1306750
See related
EnsemblRapid:ENSRNOG00000042018 AllianceGenome:RGD:1306750
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
RGD1306750
Summary
Predicted to be located in extracellular region. [provided by Alliance of Genome Resources, Nov 2024]
Expression
Restricted expression toward (RPKM 25.9) See more
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Genomic context

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See Glal in Genome Data Viewer
Location:
4q42
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 4 NC_086022.1 (167659849..167662750, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 4 NC_051339.1 (165928441..165931317, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 4 NC_005103.4 (166800222..166803865, complement)

Chromosome 4 - NC_086022.1Genomic Context describing neighboring genes Neighboring gene proline-rich protein 2-like Neighboring gene peptidylglycine alpha-amidating monooxygenase, pseudogene 1 Neighboring gene taste receptor, type 2, member 120 Neighboring gene taste receptor, type 2, member 121

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Gene Ontology Provided by RGD

Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
gliadoralin-A

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001108649.1 → NP_001102119.1  gliadoralin-A precursor

    See identical proteins and their annotated locations for NP_001102119.1

    Status: PROVISIONAL

    Source sequence(s)
    CH473964
    UniProtKB/Swiss-Prot
    D3Z9M3
    Related
    ENSRNOP00000058891.1, ENSRNOT00000067909.3

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086022.1 Reference GRCr8

    Range
    167659849..167662750 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063286370.1 → XP_063142440.1  gliadoralin-A isoform X1

    UniProtKB/Swiss-Prot
    D3Z9M3

  2. XM_039107903.2 → XP_038963831.1  gliadoralin-A isoform X1

    UniProtKB/Swiss-Prot
    D3Z9M3
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
D3Z9M3.1 GenPept UniProtKB/Swiss-Prot:D3Z9M3

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.