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Tmem263 transmembrane protein 263 [ Rattus norvegicus (Norway rat) ]

Gene ID: 362857, updated on 2-Nov-2024

Summary

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Official Symbol
Tmem263provided by RGD
Official Full Name
transmembrane protein 263provided by RGD
Primary source
RGD:1563325
See related
AllianceGenome:RGD:1563325
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
RGD1563325
Summary
Predicted to be located in membrane. Orthologous to human TMEM263 (transmembrane protein 263). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Biased expression in Muscle (RPKM 120.3), Brain (RPKM 112.3) and 9 other tissues See more
Orthologs
human mouse all
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Genomic context

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See Tmem263 in Genome Data Viewer
Location:
7q13
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 7 NC_086025.1 (20497852..20516011, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 7 NC_051342.1 (18610151..18628311, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 7 NC_005106.4 (24647083..24668381, complement)

Chromosome 7 - NC_086025.1Genomic Context describing neighboring genes Neighboring gene sialic acid synthase-like Neighboring gene cryptochrome circadian regulator 1 Neighboring gene mitochondrial transcription termination factor 2 Neighboring gene four and a half LIM domains 4 Neighboring gene uncharacterized LOC134479851

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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Related articles in PubMed

  1. Phosphorylation and degradation of tomosyn-2 de-represses insulin secretion. Bhatnagar S, et al. J Biol Chem, 2014 Sep 5. PMID 25002582, Free PMC Article
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by RGD

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
transmembrane protein 263

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001108739.2 → NP_001102209.1  transmembrane protein 263

    See identical proteins and their annotated locations for NP_001102209.1

    Status: VALIDATED

    Source sequence(s)
    JAXUCZ010000007
    UniProtKB/TrEMBL
    B2RZ08
    Conserved Domains (1) summary
    pfam15475
    Location:24 → 114
    UPF0444; Transmembrane protein C12orf23, UPF0444

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086025.1 Reference GRCr8

    Range
    20497852..20516011 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017594918.3 → XP_017450407.1  transmembrane protein 263 isoform X1

    UniProtKB/TrEMBL
    B2RZ08
    Conserved Domains (1) summary
    pfam15475
    Location:24 → 114
    UPF0444; Transmembrane protein C12orf23, UPF0444
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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