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Dnajc22 DnaJ heat shock protein family (Hsp40) member C22 [ Rattus norvegicus (Norway rat) ]

Gene ID: 362998, updated on 10-Jul-2024

Summary

Official Symbol
Dnajc22provided by RGD
Official Full Name
DnaJ heat shock protein family (Hsp40) member C22provided by RGD
Primary source
RGD:1311098
See related
EnsemblRapid:ENSRNOG00000053498 AllianceGenome:RGD:1311098
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
RGD1311098
Summary
Predicted to be integral component of membrane. Orthologous to human DNAJC22 (DnaJ heat shock protein family (Hsp40) member C22). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in Liver (RPKM 411.9), Kidney (RPKM 275.2) and 5 other tissues See more
Orthologs
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Genomic context

See Dnajc22 in Genome Data Viewer
Location:
7q36
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 7 NC_086025.1 (132136516..132141802)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 7 NC_051342.1 (130257504..130262880)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 7 NC_005106.4 (140781676..140786929)

Chromosome 7 - NC_086025.1Genomic Context describing neighboring genes Neighboring gene trophinin associated protein Neighboring gene complement C1q like 4 Neighboring gene spermatogenesis associated, serine-rich 2 Neighboring gene U1 spliceosomal RNA Neighboring gene potassium voltage-gated channel subfamily H member 3

Genomic regions, transcripts, and products

Expression

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

General protein information

Preferred Names
dnaJ homolog subfamily C member 22
Names
DnaJ (Hsp40) homolog, subfamily C, member 22

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001014204.1NP_001014226.1  dnaJ homolog subfamily C member 22

    See identical proteins and their annotated locations for NP_001014226.1

    Status: PROVISIONAL

    Source sequence(s)
    BC086949
    UniProtKB/Swiss-Prot
    Q5PR00
    UniProtKB/TrEMBL
    A6KCE1
    Related
    ENSRNOP00000102734.1, ENSRNOT00000167586.1
    Conserved Domains (1) summary
    smart00271
    Location:278335
    DnaJ; DnaJ molecular chaperone homology domain

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086025.1 Reference GRCr8

    Range
    132136516..132141802
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006257363.5XP_006257425.1  dnaJ homolog subfamily C member 22 isoform X1

    See identical proteins and their annotated locations for XP_006257425.1

    UniProtKB/Swiss-Prot
    Q5PR00
    UniProtKB/TrEMBL
    A6KCE1
    Conserved Domains (1) summary
    smart00271
    Location:278335
    DnaJ; DnaJ molecular chaperone homology domain