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Gsta3l1 glutathione S-transferase alpha 3 like 1 [ Rattus norvegicus (Norway rat) ]

Gene ID: 363205, updated on 2-Nov-2024

Summary

Official Symbol
Gsta3l1provided by RGD
Official Full Name
glutathione S-transferase alpha 3 like 1provided by RGD
Primary source
RGD:1562107
See related
EnsemblRapid:ENSRNOG00000024755 AllianceGenome:RGD:1562107
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
RGD1562107
Summary
Predicted to enable glutathione transferase activity. Predicted to be involved in glutathione metabolic process and xenobiotic metabolic process. [provided by Alliance of Genome Resources, Nov 2024]
Expression
Biased expression in Thymus (RPKM 45.6), Lung (RPKM 33.4) and 2 other tissues See more
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Genomic context

See Gsta3l1 in Genome Data Viewer
Location:
9q13
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 9 NC_086027.1 (31115727..31128997)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 9 NC_051344.1 (23619691..23628517)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 9 NC_005108.4 (27311229..27324452)

Chromosome 9 - NC_086027.1Genomic Context describing neighboring genes Neighboring gene translocation associated membrane protein 2 Neighboring gene uncharacterized LOC102549948 Neighboring gene uncharacterized LOC102550123 Neighboring gene transmembrane protein 14A Neighboring gene makorin ring finger protein 1, pseudogene 1 Neighboring gene glutathione S-transferase alpha 3

Genomic regions, transcripts, and products

Expression

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

General gene information

Markers

Gene Ontology Provided by RGD

Function Evidence Code Pubs
enables glutathione transferase activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables glutathione transferase activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in glutathione metabolic process IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in xenobiotic metabolic process IBA
Inferred from Biological aspect of Ancestor
more info
 

General protein information

Preferred Names
glutathione S-transferase; glutathione S-transferase alpha 3 like 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001431281.1NP_001418210.1  glutathione S-transferase alpha 3 like 1

    Status: VALIDATED

    Source sequence(s)
    JAXUCZ010000009

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086027.1 Reference GRCr8

    Range
    31115727..31128997
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_343545.9XP_343546.4  glutathione S-transferase

    Related
    ENSRNOP00000107281.1, ENSRNOT00000172353.1