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SRAE_1000263600 Protein-tyrosine phosphatase, receptor/non-receptor type domain and Protein-tyrosine/Dual specificity phosphatase domain and Protein-tyrosine phosphatase, catalytic domain-containing protein [ Strongyloides ratti ]

Gene ID: 36376747, updated on 21-Dec-2023

Summary

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Gene symbol
SRAE_1000263600
Gene description
Protein-tyrosine phosphatase, receptor/non-receptor type domain and Protein-tyrosine/Dual specificity phosphatase domain and Protein-tyrosine phosphatase, catalytic domain-containing protein
Locus tag
SRAE_1000263600
Gene type
protein coding
RNA name
Protein-tyrosine phosphatase, receptor/non-receptor type domain and Protein-tyrosine/Dual specificity phosphatase domain and Protein-tyrosine phosphatase, catalytic domain-containing protein
RefSeq status
PROVISIONAL
Organism
Strongyloides ratti (strain: ED321 Heterogonic)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Panagrolaimoidea; Strongyloididae; Strongyloides
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Genomic context

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See SRAE_1000263600 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
3
Sequence:
Chromosome: 1; NC_037307.1 (8468514..8472010, complement)

Chromosome 1 - NC_037307.1Genomic Context describing neighboring genes Neighboring gene Endoribonuclease Dicer Neighboring gene Condensin-2 complex subunit D3 Neighboring gene C901 Neighboring gene Ero1-like protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037307.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein tyrosine phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Protein-tyrosine phosphatase, receptor/non-receptor type domain and Protein-tyrosine/Dual specificity phosphatase domain and Protein-tyrosine phosphatase, catalytic domain-containing protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_037307.1 Reference assembly

    Range
    8468514..8472010 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024649736.1 → XP_024503583.1  Protein-tyrosine phosphatase, receptor/non-receptor type domain and Protein-tyrosine/Dual specificity phosphatase domain and Protein-tyrosine phosphatase, catalytic domain-containing protein [Strongyloides ratti]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A090L3T4
    Conserved Domains (2) summary
    smart00194
    Location:856 → 1093
    PTPc; Protein tyrosine phosphatase, catalytic domain
    cl27757
    Location:564 → 781
    Y_phosphatase; Protein-tyrosine phosphatase
Nucleotide Protein
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