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Cnrip1 cannabinoid receptor interacting protein 1 [ Rattus norvegicus (Norway rat) ]

Gene ID: 364208, updated on 2-Nov-2024

Summary

Official Symbol
Cnrip1provided by RGD
Official Full Name
cannabinoid receptor interacting protein 1provided by RGD
Primary source
RGD:1308373
See related
EnsemblRapid:ENSRNOG00000005326 AllianceGenome:RGD:1308373
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
Crip1a; RGD1308373
Summary
Enables type 1 cannabinoid receptor binding activity. Predicted to be involved in negative regulation of signaling receptor activity and regulation of trans-synaptic signaling by endocannabinoid, modulating synaptic transmission. Predicted to be located in cytoplasm. Predicted to be active in several cellular components, including GABA-ergic synapse; glutamatergic synapse; and presynapse. Orthologous to human CNRIP1 (cannabinoid receptor interacting protein 1). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Biased expression in Brain (RPKM 222.3), Lung (RPKM 55.7) and 8 other tissues See more
Orthologs
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Genomic context

See Cnrip1 in Genome Data Viewer
Location:
14q22
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 14 NC_086032.1 (95664435..95707062)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 14 NC_051349.1 (91462877..91492739)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 14 NC_005113.4 (100217547..100247235)

Chromosome 14 - NC_086032.1Genomic Context describing neighboring genes Neighboring gene F-box protein 48 Neighboring gene uncharacterized LOC134481790 Neighboring gene pleckstrin Neighboring gene uncharacterized LOC120096673 Neighboring gene protein phosphatase 3, regulatory subunit B, alpha Neighboring gene uncharacterized LOC134481791 Neighboring gene partner of NOB1 homolog

Genomic regions, transcripts, and products

Expression

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by RGD

Function Evidence Code Pubs
enables type 1 cannabinoid receptor binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables type 1 cannabinoid receptor binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables type 1 cannabinoid receptor binding ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
is_active_in GABA-ergic synapse ISO
Inferred from Sequence Orthology
more info
 
located_in cytoplasm ISO
Inferred from Sequence Orthology
more info
 
is_active_in glutamatergic synapse ISO
Inferred from Sequence Orthology
more info
 
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in plasma membrane ISO
Inferred from Sequence Orthology
more info
 
is_active_in presynapse ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
CB1 cannabinoid receptor-interacting protein 1
Names
CB1 cannabinoid receptor interacting
CRIP-1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001014232.2NP_001014254.1  CB1 cannabinoid receptor-interacting protein 1

    See identical proteins and their annotated locations for NP_001014254.1

    Status: VALIDATED

    Source sequence(s)
    JAXUCZ010000014
    UniProtKB/Swiss-Prot
    A2RQR5, Q5M7A7
    UniProtKB/TrEMBL
    A0A0G2K1I5, A6JPY5
    Related
    ENSRNOP00000007104.4, ENSRNOT00000007104.8
    Conserved Domains (1) summary
    pfam15043
    Location:4158
    CNRIP1; CB1 cannabinoid receptor-interacting protein 1

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086032.1 Reference GRCr8

    Range
    95664435..95707062
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063273439.1XP_063129509.1  CB1 cannabinoid receptor-interacting protein 1 isoform X1