U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

CAALFM_C703660CA proline--tRNA ligase [ Candida albicans SC5314 ]

Gene ID: 3646226, updated on 30-Nov-2023

Summary

Go to the top of the page Help
Gene symbol
CAALFM_C703660CA
Gene description
proline--tRNA ligase
Locus tag
CAALFM_C703660CA
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Candida albicans SC5314 (strain: SC5314, nat-host: Homo sapiens, culture-collection: ATCC:MYA-2876)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Candida/Lodderomyces clade; Candida
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See CAALFM_C703660CA in Genome Data Viewer
Location:
chromosome: 7
Exon count:
1
Sequence:
Chromosome: 7; NC_032095.1 (812904..814979, complement)

Chromosome 7 - NC_032095.1Genomic Context describing neighboring genes Neighboring gene asparagine--tRNA ligase Neighboring gene histidinol-phosphatase Neighboring gene asparagine--tRNA ligase Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_032095.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Ydj1 governs fungal morphogenesis and stress response, and facilitates mitochondrial protein import via Mas1 and Mas2. Xie JL, et al. Microb Cell, 2017 Oct 2. PMID 29082232, Free PMC Article
  2. A functional portrait of Med7 and the mediator complex in Candida albicans. Tebbji F, et al. PLoS Genet, 2014 Nov. PMID 25375174, Free PMC Article
  3. Global proteomic analyses define an environmentally contingent Hsp90 interactome and reveal chaperone-dependent regulation of stress granule proteins and the R2TP complex in a fungal pathogen. O'Meara TR, et al. PLoS Biol, 2019 Jul. PMID 31283755, Free PMC Article
  4. Assembly of a phased diploid Candida albicans genome facilitates allele-specific measurements and provides a simple model for repeat and indel structure. Muzzey D, et al. Genome Biol, 2013. PMID 24025428, Free PMC Article
  5. Assembly of the Candida albicans genome into sixteen supercontigs aligned on the eight chromosomes. van het Hoog M, et al. Genome Biol, 2007. PMID 17419877, Free PMC Article

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

Go to the top of the page Help
Products Interactant Other Gene Complex Source Pubs Description

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables aminoacyl-tRNA editing activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables proline-tRNA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in prolyl-tRNA aminoacylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of aminoacyl-tRNA synthetase multienzyme complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
proline--tRNA ligase
XP_712153.1
  • Protein with similarity to amino acid-tRNA ligase; stationary phase enriched protein; GlcNAc-induced protein

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_032095.1 Reference assembly

    Range
    812904..814979 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_707060.1 → XP_712153.1  proline--tRNA ligase [Candida albicans SC5314]

    See identical proteins and their annotated locations for XP_712153.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A8H6C229, G1UAT0, Q3MNZ1, Q59R20
    Conserved Domains (1) summary
    PRK08661
    Location:185 → 691
    PRK08661; prolyl-tRNA synthetase; Provisional
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials