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RPS25B ribosomal 40S subunit protein S25B [ Candida albicans SC5314 ]

Gene ID: 3646972, updated on 30-Nov-2023

Summary

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Gene symbol
RPS25B
Gene description
ribosomal 40S subunit protein S25B
Locus tag
CAALFM_C503540CA
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Candida albicans SC5314 (strain: SC5314, nat-host: Homo sapiens, culture-collection: ATCC:MYA-2876)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Candida/Lodderomyces clade; Candida
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Genomic context

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See RPS25B in Genome Data Viewer
Location:
chromosome: 5
Exon count:
1
Sequence:
Chromosome: 5; NC_032093.1 (793426..793743, complement)

Chromosome 5 - NC_032093.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene ubiquinone-binding protein Neighboring gene nucleoporin Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_032093.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Genomic Landscape of the Fungus-Specific SWI/SNF Complex Subunit, Snf6, in Candida albicans. Tebbji F, et al. mSphere, 2017 Nov-Dec. PMID 29152582, Free PMC Article
  2. A functional portrait of Med7 and the mediator complex in Candida albicans. Tebbji F, et al. PLoS Genet, 2014 Nov. PMID 25375174, Free PMC Article
  3. Assembly of a phased diploid Candida albicans genome facilitates allele-specific measurements and provides a simple model for repeat and indel structure. Muzzey D, et al. Genome Biol, 2013. PMID 24025428, Free PMC Article
  4. Assembly of the Candida albicans genome into sixteen supercontigs aligned on the eight chromosomes. van het Hoog M, et al. Genome Biol, 2007. PMID 17419877, Free PMC Article
  5. The diploid genome sequence of Candida albicans. Jones T, et al. Proc Natl Acad Sci U S A, 2004 May 11. PMID 15123810, Free PMC Article

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of cytosolic small ribosomal subunit IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ribosomal 40S subunit protein S25B
XP_711416.1
  • Ribosomal protein; macrophage/pseudohyphal-induced after 16 h; repressed upon phagocytosis by murine macrophage; transcript positively regulated by Tbf1; 5'-UTR intron; Hap43-induced; Spider biofilm repressed

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_032093.1 Reference assembly

    Range
    793426..793743 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_706324.1 → XP_711416.1  ribosomal 40S subunit protein S25B [Candida albicans SC5314]

    See identical proteins and their annotated locations for XP_711416.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    A0A1D8PNQ6
    UniProtKB/TrEMBL
    A0A8H6EZQ8, C4YRM5
    Conserved Domains (1) summary
    pfam03297
    Location:30 → 103
    Ribosomal_S25; S25 ribosomal protein
Nucleotide Protein
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