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D1T98_gp1 ORF1 [ Dioscorea bacilliform TR virus ]

Gene ID: 37619898, updated on 29-Jul-2022

Summary

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Gene symbol
D1T98_gp1
Gene description
ORF1
Locus tag
D1T98_gp1
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Dioscorea bacilliform TR virus (strain: DBV9, isolate: CRB496, nat-host: Dioscorea trifida variety Borelli voucher PT-IG-00432)
Lineage
Viruses; Ortervirales; Caulimoviridae; Badnavirus
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Genomic context

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Sequence:
NC_038995.1 (444..875)

NC_038995.1Genomic Context describing neighboring genes Neighboring gene ORF2 Neighboring gene ORF3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_038995.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome sequence of Dioscorea bacilliform TR virus, a member of the genus Badnavirus infecting Dioscorea spp., sheds light on the possible function of endogenous Dioscorea bacilliform viruses. Umber M, et al. Arch Virol, 2017 Feb. PMID 27770216

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
ORF1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_038995.1 Reference assembly

    Range
    444..875
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_009508441.1 ORF1 [Dioscorea bacilliform TR virus]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A1J0AHH2
    Conserved Domains (1) summary
    pfam07028
    Location:22 → 130
    DUF1319; Protein of unknown function (DUF1319)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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