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uncharacterized protein [ Saccharomyces cerevisiae S288C ]

Gene ID: 3799968, updated on 2-Nov-2024

Summary

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Official Full Name
uncharacterized protein
Primary source
SGD:S000087203
Locus tag
YCL048W-A
See related
AllianceGenome:SGD:S000087203; FungiDB:YCL048W-A; VEuPathDB:YCL048W-A
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Summary
Located in cell periphery and fungal-type vacuole. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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Location:
chromosome: III
Exon count:
1
Sequence:
Chromosome: III; NC_001135.5 (41488..41727)

Chromosome III - NC_001135.5Genomic Context describing neighboring genes Neighboring gene bifunctional AP-4-A phosphorylase/ADP sulfurylase Neighboring gene uncharacterized protein Neighboring gene Sps22p Neighboring gene nicotinamide-nucleotide adenylyltransferase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_001135.5

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Mapping of transcription start sites in Saccharomyces cerevisiae using 5' SAGE. Zhang Z, et al. Nucleic Acids Res, 2005. PMID 15905473, Free PMC Article
  2. Finding functional features in Saccharomyces genomes by phylogenetic footprinting. Cliften P, et al. Science, 2003 Jul 4. PMID 12775844
  3. The complete DNA sequence of yeast chromosome III. Oliver SG, et al. Nature, 1992 May 7. PMID 1574125
  4. One library to make them all: streamlining the creation of yeast libraries via a SWAp-Tag strategy. Yofe I, et al. Nat Methods, 2016 Apr. PMID 26928762, Free PMC Article
  5. Purification of nuclear poly(A)-binding protein Nab2 reveals association with the yeast transcriptome and a messenger ribonucleoprotein core structure. Batisse J, et al. J Biol Chem, 2009 Dec 11. PMID 19840948, Free PMC Article

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Gene Ontology Provided by SGD

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in cell periphery HDA PubMed 
located_in fungal-type vacuole HDA PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
  
located_in side of membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
uncharacterized protein
NP_001032573.1
  • hypothetical protein; SWAT-GFP and mCherry fusion proteins localize to the cell periphery and vacuole; YCL048W-A has a paralog, YDR524C-B, that arose from the whole genome duplication

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001135.5 Reference assembly

    Range
    41488..41727
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001184678.1 → NP_001032573.1  TPA: uncharacterized protein YCL048W-A [Saccharomyces cerevisiae S288C]

    See identical proteins and their annotated locations for NP_001032573.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    D6VQW8, Q2V2Q2
    UniProtKB/TrEMBL
    B3LU36, C7GT03, C8Z441, N1P980
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q2V2Q2.1

Gene LinkOut

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Molecular Biology Databases
Research Materials