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Gm1604b predicted gene 1604b [ Mus musculus (house mouse) ]

Gene ID: 381059, updated on 17-Aug-2024

Summary

Official Symbol
Gm1604bprovided by MGI
Official Full Name
predicted gene 1604bprovided by MGI
Primary source
MGI:MGI:2686450
See related
Ensembl:ENSMUSG00000023809 AllianceGenome:MGI:2686450
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm1604
Expression
Broad expression in frontal lobe adult (RPKM 2.6), cortex adult (RPKM 1.7) and 17 other tissues See more
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Genomic context

See Gm1604b in Genome Data Viewer
Location:
17 A1; 17 4.61 cM
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 17 NC_000083.7 (7292942..7354996)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 17 NC_000083.6 (7025543..7087597)

Chromosome 17 - NC_000083.7Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer mm9_chr17:7165470-7165771 Neighboring gene STARR-positive B cell enhancer ABC_E2470 Neighboring gene T cell activation GTPase activating protein 1 Neighboring gene STARR-seq mESC enhancer starr_41744 Neighboring gene ribonuclease T2B Neighboring gene predicted gene, 25119 Neighboring gene STARR-seq mESC enhancer starr_41745 Neighboring gene ribosomal protein S6 kinase, polypeptide 2 Neighboring gene STARR-positive B cell enhancer mm9_chr17:7374004-7374305 Neighboring gene STARR-seq mESC enhancer starr_41746 Neighboring gene VISTA enhancer mm108 Neighboring gene STARR-seq mESC enhancer starr_41751 Neighboring gene G protein-coupled receptor 31, D17Leh66a region

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

General protein information

Preferred Names
uncharacterized protein LOC381059

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001033442.3NP_001028614.1  uncharacterized protein LOC381059

    See identical proteins and their annotated locations for NP_001028614.1

    Status: VALIDATED

    Source sequence(s)
    AC122413, AK162826
    Consensus CDS
    CCDS28375.1
    UniProtKB/TrEMBL
    Q3TRG0
    Related
    ENSMUST00000097422.7

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000083.7 Reference GRCm39 C57BL/6J

    Range
    7292942..7354996
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)