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Gm5148 predicted gene 5148 [ Mus musculus (house mouse) ]

Gene ID: 381438, updated on 17-Aug-2024

Summary

Official Symbol
Gm5148provided by MGI
Official Full Name
predicted gene 5148provided by MGI
Primary source
MGI:MGI:3646006
See related
Ensembl:ENSMUSG00000058174 AllianceGenome:MGI:3646006
Gene type
protein coding
RefSeq status
PREDICTED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
EG381438
Expression
Broad expression in liver E14 (RPKM 404.1), CNS E11.5 (RPKM 287.4) and 25 other tissues See more
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Genomic context

See Gm5148 in Genome Data Viewer
Location:
3 B; 3 18.46 cM
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 3 NC_000069.7 (37768339..37778509, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 3 NC_000069.6 (37714190..37724360, complement)

Chromosome 3 - NC_000069.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 46799 Neighboring gene STARR-seq mESC enhancer starr_07440 Neighboring gene predicted gene, 42211 Neighboring gene STARR-seq mESC enhancer starr_07442 Neighboring gene ribosomal protein S23, pseudogene 1 Neighboring gene predicted gene, 36620 Neighboring gene ribosomal protein L31, pseudogene 15 Neighboring gene STARR-seq mESC enhancer starr_07446 Neighboring gene predicted gene, 42210 Neighboring gene predicted gene 42921

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (1) 

General gene information

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

General protein information

Preferred Names
uncharacterized protein LOC381438

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_198657.2NP_941059.1  uncharacterized protein LOC381438

    See identical proteins and their annotated locations for NP_941059.1

    Status: PREDICTED

    Source sequence(s)
    AK039710
    Consensus CDS
    CCDS50896.1
    UniProtKB/TrEMBL
    Q8BGG2
    Related
    ENSMUSP00000078691.5, ENSMUST00000079755.5

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000069.7 Reference GRCm39 C57BL/6J

    Range
    37768339..37778509 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)