U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Gm5373 predicted gene 5373 [ Mus musculus (house mouse) ]

Gene ID: 385024, updated on 17-Aug-2024

Summary

Go to the top of the page Help
Official Symbol
Gm5373provided by MGI
Official Full Name
predicted gene 5373provided by MGI
Primary source
MGI:MGI:3779485
See related
AllianceGenome:MGI:3779485
Gene type
protein coding
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Restricted expression toward testis adult (RPKM 8.1) See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See Gm5373 in Genome Data Viewer
Location:
8 B3.3; 8 34.54 cM
Exon count:
15
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 8 NC_000074.7 (72578486..72634351, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 8 NC_000074.6 (71824700..71880519, complement)

Chromosome 8 - NC_000074.7Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer ABC_E3781 Neighboring gene predicted gene, 53394 Neighboring gene STARR-positive B cell enhancer mm9_chr8:74326981-74327282 Neighboring gene STARR-positive B cell enhancer ABC_E3783 Neighboring gene STARR-positive B cell enhancer mm9_chr8:74330875-74331176 Neighboring gene STARR-positive B cell enhancer mm9_chr8:74351108-74351408 Neighboring gene predicted gene, 57790 Neighboring gene STARR-positive B cell enhancer mm9_chr8:74352588-74352888 Neighboring gene STARR-positive B cell enhancer mm9_chr8:74358279-74358580 Neighboring gene STARR-positive B cell enhancer mm9_chr8:74358941-74359242 Neighboring gene STARR-positive B cell enhancer ABC_E5017 Neighboring gene STARR-positive B cell enhancer ABC_E10510 Neighboring gene STARR-positive B cell enhancer mm9_chr8:74367100-74367401 Neighboring gene STARR-positive B cell enhancer mm9_chr8:74368145-74368446 Neighboring gene STARR-positive B cell enhancer ABC_E6658 Neighboring gene STARR-positive B cell enhancer ABC_E8244 Neighboring gene STARR-positive B cell enhancer ABC_E6659 Neighboring gene STARR-positive B cell enhancer ABC_E6660 Neighboring gene STARR-positive B cell enhancer ABC_E6661 Neighboring gene STARR-positive B cell enhancer ABC_E9730 Neighboring gene vomeronasal 2, receptor, pseudogene 91 Neighboring gene STARR-seq mESC enhancer starr_21833 Neighboring gene zinc finger protein 709 Neighboring gene cyclin B2, pseudogene Neighboring gene zinc finger protein 882

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Expression

Go to the top of the page Help
  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Hansen GM, et al. Genome Res, 2008 Oct. PMID 18799693, Free PMC Article
  2. Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Zambrowicz BP, et al. Proc Natl Acad Sci U S A, 2003 Nov 25. PMID 14610273, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Markers

Homology

General protein information

Go to the top of the page Help
Preferred Names
ankyrin repeat domain-containing protein 7-like; inversin-like; neurogenic locus notch homolog protein 1-like; uncharacterized protein Gm5373

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000074.7 Reference GRCm39 C57BL/6J

    Range
    72578486..72634351 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017313040.3 → XP_017168529.2  inversin-like isoform X3

    Conserved Domains (3) summary
    sd00045
    Location:14 → 43
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:17 → 108
    Ank_2; Ankyrin repeats (3 copies)
    NF033761
    Location:298 → 401
    gliding_GltJ; adventurous gliding motility protein GltJ

  2. XM_011242348.4 → XP_011240650.2  neurogenic locus notch homolog protein 1-like isoform X1

    Conserved Domains (3) summary
    sd00045
    Location:84 → 115
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:89 → 180
    Ank_2; Ankyrin repeats (3 copies)
    NF033761
    Location:370 → 485
    gliding_GltJ; adventurous gliding motility protein GltJ

  3. XM_036154430.1 → XP_036010323.1  uncharacterized protein Gm5373 isoform X2

    Conserved Domains (3) summary
    sd00045
    Location:84 → 115
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:89 → 180
    Ank_2; Ankyrin repeats (3 copies)
    NF033761
    Location:324 → 427
    gliding_GltJ; adventurous gliding motility protein GltJ

  4. XM_006509824.4 → XP_006509887.1  ankyrin repeat domain-containing protein 7-like isoform X4

    Conserved Domains (2) summary
    sd00045
    Location:84 → 115
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:89 → 180
    Ank_2; Ankyrin repeats (3 copies)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials