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KRTAP5-10 keratin associated protein 5-10 [ Homo sapiens (human) ]

Gene ID: 387273, updated on 3-Dec-2023

Summary

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Official Symbol
KRTAP5-10provided by HGNC
Official Full Name
keratin associated protein 5-10provided by HGNC
Primary source
HGNC:HGNC:23605
See related
Ensembl:ENSG00000204572 AllianceGenome:HGNC:23605
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
KRTAP5.10
Summary
Predicted to be located in cytosol. [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

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Location:
11q13.4
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 11 NC_000011.10 (71565563..71566735)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 11 NC_000011.9 (71276609..71277781)

Chromosome 11 - NC_000011.10Genomic Context describing neighboring genes Neighboring gene keratin associated protein 5-8 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:71259339-71259884 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:71259885-71260429 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 5170 Neighboring gene keratin associated protein 5-9 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:71276996-71277811 Neighboring gene keratin associated protein 5-13, pseudogene Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:71289681-71290194 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:71290195-71290706 Neighboring gene keratin associated protein 5-14, pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Identification of two novel clusters of ultrahigh-sulfur keratin-associated protein genes on human chromosome 11. Yahagi S, et al. Biochem Biophys Res Commun, 2004 Jun 4. PMID 15144888
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Find tests for this gene in the NIH Genetic Testing Registry (GTR)

Review eQTL and phenotype association data in this region using PheGenI

Variation

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See variants in ClinVar

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

Genotypes

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Gene Ontology Provided by GOA

Component Evidence Code Pubs
located_in cytosol TAS
Traceable Author Statement
more info
  
located_in intermediate filament IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
keratin-associated protein 5-10
Names
keratin-associated protein 5.10
ultrahigh sulfur keratin-associated protein 5.10

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001012710.2 → NP_001012728.1  keratin-associated protein 5-10

    See identical proteins and their annotated locations for NP_001012728.1

    Status: VALIDATED

    Source sequence(s)
    AB126079, AP000867
    Consensus CDS
    CCDS41684.1
    UniProtKB/Swiss-Prot
    B9EHA4, Q6L8G5
    Related
    ENSP00000381542.1, ENST00000398531.3
    Conserved Domains (1) summary
    pfam13885
    Location:174 → 199
    Keratin_B2_2; Keratin, high sulfur B2 protein

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000011.10 Reference GRCh38.p14 Primary Assembly

    Range
    71565563..71566735
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q6L8G5.1 GenPept UniProtKB/Swiss-Prot:Q6L8G5

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Chemical Information
Molecular Biology Databases
Research Materials
Miscellaneous