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LOC392440 MAGE family member B18 pseudogene [ Homo sapiens (human) ]

Gene ID: 392440, updated on 17-Sep-2024

Summary

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Gene symbol
LOC392440
Gene description
MAGE family member B18 pseudogene
See related
Ensembl:ENSG00000229347
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See LOC392440 in Genome Data Viewer
Location:
Xp21.1
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) X NC_000023.11 (35058966..35059973)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) X NC_060947.1 (34653974..34654981)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) X NC_000023.10 (35077083..35078090)

Chromosome X - NC_000023.11Genomic Context describing neighboring genes Neighboring gene transmembrane protein 47 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chrX:34782794-34783536 Neighboring gene family with sequence similarity 47 member B Neighboring gene ReSE screen-validated silencer GRCh37_chrX:35063242-35063449 Neighboring gene Sharpr-MPRA regulatory region 13056 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 29517 Neighboring gene RNA, U6 small nuclear 1087, pseudogene Neighboring gene siah E3 ubiquitin protein ligase 1 pseudogene 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Other Names

  • melanoma antigen family B, 18 pseudogene
  • melanoma antigen family B18 pseudogene

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_022654.1 

    Range
    101..1108
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000023.11 Reference GRCh38.p14 Primary Assembly

    Range
    35058966..35059973
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060947.1 Alternate T2T-CHM13v2.0

    Range
    34653974..34654981
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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