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RPS16P2 ribosomal protein S16 pseudogene 2 [ Homo sapiens (human) ]

Gene ID: 402069, updated on 17-Sep-2024

Summary

Official Symbol
RPS16P2provided by HGNC
Official Full Name
ribosomal protein S16 pseudogene 2provided by HGNC
Primary source
HGNC:HGNC:35928
See related
Ensembl:ENSG00000213729 AllianceGenome:HGNC:35928
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
RPS16_1_197
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Genomic context

See RPS16P2 in Genome Data Viewer
Location:
2p24.1
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (20155573..20156111, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 2 NC_060926.1 (20189128..20189666, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (20355334..20355872, complement)

Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene LAPTM4A divergent transcript Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:20280320-20280876 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:20280877-20281433 Neighboring gene H3K27ac hESC enhancer GRCh37_chr2:20291019-20291520 Neighboring gene H3K27ac hESC enhancer GRCh37_chr2:20291521-20292020 Neighboring gene Sharpr-MPRA regulatory region 8017 Neighboring gene uncharacterized LOC107985807 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:20335699-20336318 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:20336319-20336938 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:20336939-20337558 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:20341040-20341624 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 15375 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 15376 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 15377 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 15378 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 15379 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 15380 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 11198 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:20364000-20364500 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 15381 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:20370169-20371018 Neighboring gene RNA, 7SL, cytoplasmic 140, pseudogene Neighboring gene RNA, U6 small nuclear 961, pseudogene

Genomic regions, transcripts, and products

Phenotypes

EBI GWAS Catalog

Description
Genome-wide association study of chemotherapeutic agent-induced severe neutropenia/leucopenia for patients in Biobank Japan.
EBI GWAS Catalog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_010786.2 

    Range
    101..639
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    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

    Range
    20155573..20156111 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060926.1 Alternate T2T-CHM13v2.0

    Range
    20189128..20189666 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)