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TraAM80_10481 group II trans-sialidase superfamily [ Trypanosoma rangeli ]

Gene ID: 40334414, updated on 21-Dec-2023

Summary

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Gene symbol
TraAM80_10481
Gene description
group II trans-sialidase superfamily
Locus tag
TraAM80_10481
Gene type
protein coding
RNA name
group II trans-sialidase superfamily
RefSeq status
PROVISIONAL
Organism
Trypanosoma rangeli (strain: AM80, nat-host: Homo sapiens, culture-collection: TCC/USP:086)
Lineage
Eukaryota; Discoba; Euglenozoa; Kinetoplastea; Metakinetoplastina; Trypanosomatida; Trypanosomatidae; Trypanosoma; Herpetosoma
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Genomic context

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See TraAM80_10481 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
1

NW_021706742.1Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_021706742.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genomic comparison of Trypanosoma conorhini and Trypanosoma rangeli to Trypanosoma cruzi strains of high and low virulence. Bradwell KR, et al. BMC Genomics, 2018 Oct 24. PMID 30355302, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables exo-alpha-sialidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ganglioside catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in oligosaccharide catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in intracellular membrane-bounded organelle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
group II trans-sialidase superfamily

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_021706742.1 Reference assembly

    Range
    508..2079
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029387097.1 → XP_029233062.1  group II trans-sialidase superfamily [Trypanosoma rangeli]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A422MP15
    Conserved Domains (1) summary
    pfam13859
    Location:70 → 410
    BNR_3; BNR repeat-like domain
Nucleotide Protein
Heading Accession and Version