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Semp2l1 SUMO/sentrin specific peptidase 2-like 1 [ Mus musculus (house mouse) ]

Gene ID: 408191, updated on 2-Nov-2024

Summary

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Official Symbol
Semp2l1provided by MGI
Official Full Name
SUMO/sentrin specific peptidase 2-like 1provided by MGI
Primary source
MGI:MGI:3644687
See related
Ensembl:ENSMUSG00000091318 AllianceGenome:MGI:3644687
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm5415; Senp14; EG408191
Summary
Predicted to enable deSUMOylase activity. Predicted to be involved in protein desumoylation. Predicted to be active in nucleus. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See Semp2l1 in Genome Data Viewer
Location:
1 B; 1 12.43 cM
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 1 NC_000067.7 (32582627..32586374, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 1 NC_000067.6 (32543546..32547293, complement)

Chromosome 1 - NC_000067.7Genomic Context describing neighboring genes Neighboring gene KH domain containing, RNA binding, signal transduction associated 2 Neighboring gene 40S ribosomal protein S28 pseudogene Neighboring gene predicted gene 9839 Neighboring gene STARR-seq mESC enhancer starr_00527 Neighboring gene predicted gene, 24732 Neighboring gene STARR-seq mESC enhancer starr_00528 Neighboring gene STARR-seq mESC enhancer starr_00529 Neighboring gene STARR-seq mESC enhancer starr_00530 Neighboring gene STARR-seq mESC enhancer starr_00531 Neighboring gene SET domain containing 3 pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A genomic analysis of rat proteases and protease inhibitors. Puente XS, et al. Genome Res, 2004 Apr. PMID 15060002, Free PMC Article
  2. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
  3. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636
  4. RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. Shibata K, et al. Genome Res, 2000 Nov. PMID 11076861, Free PMC Article
  5. Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes. Carninci P, et al. Genome Res, 2000 Oct. PMID 11042159, Free PMC Article

See all (9) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables deSUMOylase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in protein desumoylation IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
SUMO/sentrin specific peptidase 2-like 1
Names
SUMO/sentrin specific peptidase 2=like 1
sentrin 14

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001164286.1 → NP_001157758.1  SUMO/sentrin specific peptidase 2-like 1

    Status: PROVISIONAL

    Source sequence(s)
    AC122027
    Consensus CDS
    CCDS48234.1
    UniProtKB/TrEMBL
    E9PXF3
    Related
    ENSMUSP00000132789.2, ENSMUST00000171322.3
    Conserved Domains (1) summary
    cl23802
    Location:231 → 473
    Peptidase_C48; Ulp1 protease family, C-terminal catalytic domain

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000067.7 Reference GRCm39 C57BL/6J

    Range
    32582627..32586374 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

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