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PFDSM3638_RS02690 argonaute domain-containing protein [ Pyrococcus furiosus DSM 3638 ]

Gene ID: 41712340, updated on 24-Oct-2024

Summary

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Gene symbol
PFDSM3638_RS02690
Gene description
argonaute domain-containing protein
Locus tag
PFDSM3638_RS02690
Gene type
protein coding
Organism
Pyrococcus furiosus DSM 3638 (strain: DSM 3638, culture-collection: DSM:3638, type-material: type strain of Pyrococcus furiosus)
Lineage
Archaea; Methanobacteriati; Methanobacteriota; Thermococci; Thermococcales; Thermococcaceae; Pyrococcus
Old locus tag
PFDSM3638_02685
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Genomic context

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NZ_CP023154.1Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene IS6-like element ISPfu5 family transposase Neighboring gene tRNA-Arg Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_CP023154.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Pyrococcus furiosus Argonaute-mediated nucleic acid detection. He R, et al. Chem Commun (Camb), 2019 Oct 31. PMID 31589231
  2. The prokaryotic Argonaute proteins enhance homology sequence-directed recombination in bacteria. Fu L, et al. Nucleic Acids Res, 2019 Apr 23. PMID 30698806, Free PMC Article
  3. Programmable DNA-Guided Artificial Restriction Enzymes. Enghiad B, et al. ACS Synth Biol, 2017 May 19. PMID 28165224
  4. Argonaute of the archaeon Pyrococcus furiosus is a DNA-guided nuclease that targets cognate DNA. Swarts DC, et al. Nucleic Acids Res, 2015 May 26. PMID 25925567, Free PMC Article
  5. Purified Argonaute2 and an siRNA form recombinant human RISC. Rivas FV, et al. Nat Struct Mol Biol, 2005 Apr. PMID 15800637

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
argonaute domain-containing protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_CP023154.1 Reference assembly

    Range
    535964..538276 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_011011654.1 argonaute domain-containing protein [Pyrococcus furiosus]

    See identical proteins and their annotated locations for WP_011011654.1

    UniProtKB/Swiss-Prot
    Q8U3D2
    UniProtKB/TrEMBL
    A0A5C0XPW7, I6U616
    Conserved Domains (2) summary
    cd02826
    Location:333 → 753
    Piwi-like; PIWI domain. Domain found in proteins involved in RNA silencing. RNA silencing refers to a group of related gene-silencing mechanisms mediated by short RNA molecules, including siRNAs, miRNAs, and heterochromatin-related guide RNAs. The central component ...
    pfam12212
    Location:146 → 272
    PAZ_siRNAbind; PAZ domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q8U3D2.1

Gene LinkOut

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Molecular Biology Databases