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Surf4 Surfeit 4 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 41864, updated on 2-Nov-2024

Summary

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Official Symbol
Surf4provided by FlyBase
Official Full Name
Surfeit 4provided by FlyBase
Primary source
FLYBASE:FBgn0019925
Locus tag
Dmel_CG6202
See related
AllianceGenome:FB:FBgn0019925
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CG6202; Dmel\CG6202; Surf-4; SURF-4
Summary
Predicted to be involved in Golgi organization. Located in fusome. Is expressed in several structures, including adult head; germarium; gland; gut section; and mesoderm. Orthologous to human SURF4 (surfeit 4). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs
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Genomic context

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See Surf4 in Genome Data Viewer
Location:
88F1-88F1; 3-57 cM
Exon count:
4
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (15343653..15346176, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (11169375..11171898, complement)

Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene Cytoplasmic FMR1 interacting protein Neighboring gene N-acetylglucosamine kinase Neighboring gene Seryl-tRNA synthetase, mitochondrial Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene TRAPP subunit 33

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. ESCargo: a regulatable fluorescent secretory cargo for diverse model organisms. Casler JC, et al. Mol Biol Cell, 2020 Dec 15. PMID 33112725, Free PMC Article
  2. Surfeit locus gene homologs are widely distributed in invertebrate genomes. Armes N, et al. Mol Cell Biol, 1996 Oct. PMID 8816471, Free PMC Article
  3. Genetic and molecular analysis of region 88E9;88F2 in Drosophila melanogaster, including the ear gene related to human factors involved in lineage-specific leukemias. Zraly CB, et al. Genetics, 2002 Mar. PMID 11901121, Free PMC Article
  4. MIGGRI: A multi-instance graph neural network model for inferring gene regulatory networks for Drosophila from spatial expression images. Huang Y, et al. PLoS Comput Biol, 2023 Nov. PMID 37939200, Free PMC Article
  5. Organ-specific gene expression: the bHLH protein Sage provides tissue specificity to Drosophila FoxA. Fox RM, et al. Development, 2013 May. PMID 23578928, Free PMC Article

See all (50) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by FlyBase

Process Evidence Code Pubs
involved_in Golgi organization IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
located_in endomembrane system HDA PubMed 
is_active_in endoplasmic reticulum IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in endoplasmic reticulum-Golgi intermediate compartment IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in fusome IDA
Inferred from Direct Assay
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
surfeit 4
Names
CG6202-PA
Surf4-PA

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033777.3 Reference assembly

    Range
    15343653..15346176 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_057874.5 → NP_477222.1  surfeit 4 [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_477222.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    A4V2Y8, O18405, Q9VF84
    Related
    FBpp0082571
    Conserved Domains (1) summary
    pfam02077
    Location:5 → 270
    SURF4; SURF4 family
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O18405.1 O18405

Gene LinkOut

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