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Trs33 TRAPP subunit 33 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 41866, updated on 2-Nov-2024

Summary

Official Symbol
Trs33provided by FlyBase
Official Full Name
TRAPP subunit 33provided by FlyBase
Primary source
FLYBASE:FBgn0266722
Locus tag
Dmel_CG6196
See related
AllianceGenome:FB:FBgn0266722
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
BcDNA:RH37427; CG6196; Dmel\CG6196; dTrs33; TRAPPC6; Trs33p
Summary
Predicted to be involved in endoplasmic reticulum to Golgi vesicle-mediated transport. Part of TRAPPII protein complex and TRAPPIII protein complex. Used to study neurodevelopmental disorder with microcephaly, epilepsy, and brain atrophy. Human ortholog(s) of this gene implicated in neurodevelopmental disorder with microcephaly, epilepsy, and brain atrophy. Orthologous to several human genes including TRAPPC6B (trafficking protein particle complex subunit 6B). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs
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Genomic context

See Trs33 in Genome Data Viewer
Location:
88F1-88F1; 3-57 cM
Exon count:
2
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (15350345..15350995, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (11176067..11176717, complement)

Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene Surfeit 4 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene Transmembrane O-mannosyltransferase targeting cadherins 4 Neighboring gene Autophagy-related 4b Neighboring gene 3-hydroxyisobutyryl-CoA hydrolase Neighboring gene Component of oligomeric golgi complex 2

Genomic regions, transcripts, and products

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in Golgi vesicle transport IC
Inferred by Curator
more info
PubMed 
involved_in Golgi vesicle transport IEA
Inferred from Electronic Annotation
more info
 
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in vesicle-mediated transport ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
Component Evidence Code Pubs
part_of TRAPP complex IBA
Inferred from Biological aspect of Ancestor
more info
 
part_of TRAPP complex ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
part_of TRAPPII protein complex IDA
Inferred from Direct Assay
more info
PubMed 
part_of TRAPPIII protein complex IDA
Inferred from Direct Assay
more info
PubMed 
is_active_in cis-Golgi network IBA
Inferred from Biological aspect of Ancestor
more info
 
is_active_in trans-Golgi network IBA
Inferred from Biological aspect of Ancestor
more info
 

General protein information

Preferred Names
TRAPP subunit 33
Names
CG6196-PA
TRAPP subunit 33 ortholog
Trs33-PA

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033777.3 Reference assembly

    Range
    15350345..15350995 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_142193.4NP_650450.1  TRAPP subunit 33 [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_650450.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9VF82
    Related
    FBpp0082570
    Conserved Domains (1) summary
    cd14944
    Location:4150
    TRAPPC6A_Trs33; Trs33 subunit of the TRAPP complex