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LOC4325662 protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1 [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4325662, updated on 12-Jul-2024

Summary

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Gene symbol
LOC4325662
Gene description
protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1
Locus tag
OSNPB_010186900
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Genomic context

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See LOC4325662 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 1 NC_089035.1 (4657224..4659045)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 1 NC_029256.1 (4646417..4648255)

Chromosome 1 - NC_089035.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC4325661 Neighboring gene uncharacterized LOC107280580 Neighboring gene uncharacterized LOC4325663 Neighboring gene uncharacterized LOC4325665

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1
Names
Os01g0186900
P0512G09.2-1
P0512G09.2-2
P0695A04.11-1
P0695A04.11-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089035.1 Reference ASM3414082v1 Primary Assembly

    Range
    4657224..4659045
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015766157.3 → XP_015621643.1  protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1

    UniProtKB/TrEMBL
    B7EXU7, Q5SNE7, Q5SNF5
    Conserved Domains (1) summary
    pfam13359
    Location:239 → 397
    DDE_Tnp_4; DDE superfamily endonuclease
Nucleotide Protein
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