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LOC4327313 uncharacterized LOC4327313 [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4327313, updated on 12-Jul-2024

Summary

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Gene symbol
LOC4327313
Gene description
uncharacterized LOC4327313
Locus tag
OSNPB_010194000
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Also known as
P0001B06.8
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Genomic context

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See LOC4327313 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 1 NC_089035.1 (5048076..5051789, complement)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 1 NC_029256.1 (5037241..5040795, complement)

Chromosome 1 - NC_089035.1Genomic Context describing neighboring genes Neighboring gene F-box/LRR-repeat protein At4g29420 Neighboring gene uncharacterized LOC4327311 Neighboring gene protein ALWAYS EARLY 3 Neighboring gene protein IQ-DOMAIN 6 Neighboring gene BTB/POZ domain and ankyrin repeat-containing protein NPR1-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Transcriptome profiling of various organs at different developmental stages in rice Transcriptome profiling of various organs at different developmental stages in rice
  • Description: Transcriptom profiling in flower buds, flowers, flag leaves and roots sampled before flowering and after flowering, milk grains and mature seeds
  • BioProject: PRJNA243371
  • Publication: PMID 26387578
  • Analysis date: Fri Dec 15 20:02:59 2017

Bibliography

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Related articles in PubMed

  1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
uncharacterized protein LOC4327313
Names
Os01g0194000
P0671B11.39

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089035.1 Reference ASM3414082v1 Primary Assembly

    Range
    5048076..5051789 complement
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015763675.3 → XP_015619161.1  uncharacterized protein LOC4327313

    UniProtKB/TrEMBL
    A2WLM7
Nucleotide Protein
Heading Accession and Version

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