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LOC440570 uncharacterized LOC440570 [ Homo sapiens (human) ]

Gene ID: 440570, updated on 17-Sep-2024

Summary

Gene symbol
LOC440570
Gene description
uncharacterized LOC440570
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

See LOC440570 in Genome Data Viewer
Location:
1p36.13
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 1 Unlocalized Scaffold NT_187368.1 (30201..33343, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (16452135..16455277)

NT_187368.1Genomic Context describing neighboring genes Neighboring gene U1 spliceosomal RNA Neighboring gene tRNA-Asn (anticodon GTT) 26-1 Neighboring gene transfer RNA glutamic acid (anticodon UUC)

NW_025791756.1Genomic Context describing neighboring genes Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:16992232-16993198 Neighboring gene RNA, U1 small nuclear 3 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:16983417-16984225 Neighboring gene macrophage stimulating 1 pseudogene Neighboring gene transfer RNA glutamic acid (anticodon UUC) Neighboring gene uncharacterized LOC105379524 Neighboring gene transfer RNA asparagine (anticodon GUU) Neighboring gene RNA, variant U1 small nuclear 18

Genomic regions, transcripts, and products

Interactions

Products Interactant Other Gene Complex Source Pubs Description

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_135765.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC213203

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NT_187368.1 Reference GRCh38.p14 Primary Assembly

    Range
    30201..33343 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p14 PATCHES

Genomic

  1. NW_025791756.1 Reference GRCh38.p14 PATCHES

    Range
    946488..949628
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060925.1 Alternate T2T-CHM13v2.0

    Range
    16452135..16455277
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001013708.2: Suppressed sequence

    Description
    NM_001013708.2: This RefSeq was permanently suppressed because it is a nonsense-mediated mRNA decay (NMD) candidate, and because currently there is support for the transcript but not for the protein.