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RPL36AP45 ribosomal protein L36a pseudogene 45 [ Homo sapiens (human) ]

Gene ID: 441727, updated on 17-Sep-2024

Summary

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Official Symbol
RPL36AP45provided by HGNC
Official Full Name
ribosomal protein L36a pseudogene 45provided by HGNC
Primary source
HGNC:HGNC:36032
See related
Ensembl:ENSG00000240366 AllianceGenome:HGNC:36032
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
RPL36A_20_1453
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Genomic context

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See RPL36AP45 in Genome Data Viewer
Location:
15q24.2
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 15 NC_000015.10 (75186609..75186974, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 15 NC_060939.1 (73056649..73057014, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 15 NC_000015.9 (75478950..75479315, complement)

Chromosome 15 - NC_000015.10Genomic Context describing neighboring genes Neighboring gene small Cajal body-specific RNA 20 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 9835 Neighboring gene uncharacterized LOC124903530 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 9836 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 9837 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr15:75432358-75433049 Neighboring gene MPRA-validated peak2388 silencer Neighboring gene H3K4me1 hESC enhancer GRCh37_chr15:75448835-75449336 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr15:75449337-75449836 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr15:75450542-75451042 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr15:75451043-75451543 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr15:75469758-75470317 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr15:75480455-75480956 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr15:75480957-75481456 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr15:75484212-75484914 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr15:75487637-75488181 Neighboring gene uncharacterized LOC107984772 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 9839 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 9840 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 9841 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr15:75493826-75494548 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 6665 Neighboring gene chromosome 15 open reading frame 39 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 9842

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome-wide association study of chemotherapeutic agent-induced severe neutropenia/leucopenia for patients in Biobank Japan. Low SK, et al. Cancer Sci, 2013 Aug. PMID 23648065, Free PMC Article
  2. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. Balasubramanian S, et al. Genome Biol, 2009. PMID 19123937, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

EBI GWAS Catalog

Description
Genome-wide association study of chemotherapeutic agent-induced severe neutropenia/leucopenia for patients in Biobank Japan.
EBI GWAS Catalog

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_011373.2 

    Range
    101..466
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000015.10 Reference GRCh38.p14 Primary Assembly

    Range
    75186609..75186974 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060939.1 Alternate T2T-CHM13v2.0

    Range
    73056649..73057014 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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