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FAM47C family with sequence similarity 47 member C [ Homo sapiens (human) ]

Gene ID: 442444, updated on 5-Mar-2024

Summary

Official Symbol
FAM47Cprovided by HGNC
Official Full Name
family with sequence similarity 47 member Cprovided by HGNC
Primary source
HGNC:HGNC:25301
See related
Ensembl:ENSG00000198173 MIM:301067; AllianceGenome:HGNC:25301
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Summary
This gene encodes a product belonging to a family of proteins with unknown function. The coding sequence of this family member includes several tandemly repeated regions. [provided by RefSeq, Sep 2011]
Orthologs
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Genomic context

Location:
Xp21.1
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) X NC_000023.11 (37008366..37011664)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) X NC_060947.1 (36604146..36607444)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) X NC_000023.10 (37026439..37029737)

Chromosome X - NC_000023.11Genomic Context describing neighboring genes Neighboring gene H3K4me1 hESC enhancer GRCh37_chrX:36980637-36981137 Neighboring gene H3K27ac hESC enhancer GRCh37_chrX:36981332-36981832 Neighboring gene TFDP1 pseudogene 2 Neighboring gene LanC like 3 pseudogene Neighboring gene ferritin heavy chain like 18, pseudogene Neighboring gene ferritin heavy chain 1 pseudogene 29

Genomic regions, transcripts, and products

Interactions

Products Interactant Other Gene Complex Source Pubs Description

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_021373.1 RefSeqGene

    Range
    5008..8306
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001013736.3NP_001013758.1  putative protein FAM47C

    See identical proteins and their annotated locations for NP_001013758.1

    Status: VALIDATED

    Source sequence(s)
    BX842568
    Consensus CDS
    CCDS35227.1
    UniProtKB/Swiss-Prot
    Q5HY64, Q6ZU46
    Related
    ENSP00000367913.3, ENST00000358047.5
    Conserved Domains (1) summary
    pfam14642
    Location:1257
    FAM47; FAM47 family

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000023.11 Reference GRCh38.p14 Primary Assembly

    Range
    37008366..37011664
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060947.1 Alternate T2T-CHM13v2.0

    Range
    36604146..36607444
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)