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LOC446147 ovoperoxidase [ Lytechinus variegatus (green sea urchin) ]

Gene ID: 446147, updated on 7-Dec-2023

Summary

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Gene symbol
LOC446147
Gene description
ovoperoxidase
See related
EnsemblRapid:LOC446147
Gene type
protein coding
RefSeq status
MODEL
Organism
Lytechinus variegatus
Lineage
Eukaryota; Metazoa; Echinodermata; Eleutherozoa; Echinozoa; Echinoidea; Euechinoidea; Echinacea; Temnopleuroida; Toxopneustidae; Lytechinus
Also known as
Opo
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Genomic context

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See LOC446147 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
14
Annotation release Status Assembly Chr Location
100 current Lvar_3.0 (GCF_018143015.1) 2 NC_054741.1 (67544911..67560936)

Chromosome 2 - NC_054741.1Genomic Context describing neighboring genes Neighboring gene monocarboxylate transporter 1-like Neighboring gene acyl-CoA dehydrogenase family member 10-like Neighboring gene phosphatidylinositol transfer protein Neighboring gene uncharacterized LOC121409611

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_054741.1 Chromosome 2 Reference Lvar_3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The primary and higher order structures of sea urchin ovoperoxidase as determined by cDNA cloning and predicted by homology modeling. Nomura K, et al. Arch Biochem Biophys, 1999 Jul 15. PMID 10395733
  2. Localization and developmental fate of ovoperoxidase and proteoliaisin, two proteins involved in fertilization envelope assembly. Somers CE, et al. Dev Biol, 1989 Jan. PMID 2642429
  3. Sea urchin ovoperoxidase: oocyte-specific member of a heme-dependent peroxidase superfamily that functions in the block to polyspermy. LaFleur GJ Jr, et al. Mech Dev, 1998 Jan. PMID 9510026
  4. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  5. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables heme binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables peroxidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in response to oxidative stress IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lactoperoxidase
Names
oocyte specific heme-dependent peroxidase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lytechinus variegatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Lvar_3.0 Primary Assembly

Genomic

  1. NC_054741.1 Reference Lvar_3.0 Primary Assembly

    Range
    67544911..67560936
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041600366.1 → XP_041456300.1  lactoperoxidase

    UniProtKB/TrEMBL
    O44392
    Related
    XP_041456300.1, XM_041600366.1
    Conserved Domains (1) summary
    cd09823
    Location:286 → 670
    peroxinectin_like; peroxinectin_like animal heme peroxidases
Nucleotide Protein
Heading Accession and Version

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