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SLC35F6 solute carrier family 35 member F6 [ Pan troglodytes (chimpanzee) ]

Gene ID: 459085, updated on 17-Aug-2024

Summary

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Official Symbol
SLC35F6provided by VGNC
Official Full Name
solute carrier family 35 member F6provided by VGNC
Primary source
VGNC:VGNC:10763
Locus tag
CK820_G0009562
See related
Ensembl:ENSPTRG00000033946
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Also known as
C2AH2orf18
Orthologs
human mouse all
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Genomic context

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See SLC35F6 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 12 NC_072410.2 (96075463..96093003, complement)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 2A NC_072399.1 (26760238..26777809)

Chromosome 12 - NC_072410.2Genomic Context describing neighboring genes Neighboring gene dihydropyrimidinase like 5 Neighboring gene centromere protein A Neighboring gene potassium two pore domain channel subfamily K member 3 Neighboring gene large ribosomal subunit protein eL37-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in intracellular membrane-bounded organelle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
solute carrier family 35 member F6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072410.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    96075463..96093003 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_515345.9 → XP_515345.1  solute carrier family 35 member F6 isoform X1

    See identical proteins and their annotated locations for XP_515345.1

    UniProtKB/TrEMBL
    A0A2J8NL23, A0A2J8NL28, A0A6D2VZ20, H2QHK8
    Related
    ENSPTRP00000020175.4
    Conserved Domains (1) summary
    pfam06027
    Location:95 → 222
    SLC35F; Solute carrier family 35

  2. XM_016948212.4 → XP_016803701.1  solute carrier family 35 member F6 isoform X2

    UniProtKB/TrEMBL
    A0A2J8NL23
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials