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HTRA2 HtrA serine peptidase 2 [ Canis lupus familiaris (dog) ]

Gene ID: 475782, updated on 17-Aug-2024

Summary

Official Symbol
HTRA2provided by VGNC
Official Full Name
HtrA serine peptidase 2provided by VGNC
Primary source
VGNC:VGNC:41836
See related
Ensembl:ENSCAFG00845018463
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
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Genomic context

Location:
chromosome: 17
Exon count:
8
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 17 NC_051821.1 (49469859..49472851, complement)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 17 NC_006599.4 (48252304..48255295, complement)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 17 NC_049238.1 (49111429..49114422, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 17 NC_049277.1 (48487009..48490000, complement)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 17 NC_049758.1 (48553751..48556744, complement)

Chromosome 17 - NC_051821.1Genomic Context describing neighboring genes Neighboring gene meiosis 1 associated protein Neighboring gene S-phase kinase-associated protein 1-like Neighboring gene docking protein 1 Neighboring gene lysyl oxidase like 3 Neighboring gene AUP1 lipid droplet regulating VLDL assembly factor Neighboring gene DEAQ-box RNA dependent ATPase 1

Genomic regions, transcripts, and products

General gene information

Markers

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
PubMed 
enables serine-type endopeptidase activity IEA
Inferred from Electronic Annotation
more info
PubMed 
Process Evidence Code Pubs
involved_in positive regulation of apoptotic process IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in programmed cell death IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
PubMed 

General protein information

Preferred Names
serine protease HTRA2, mitochondrial
Names
protease serine 25
NP_001271389.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001284460.1NP_001271389.1  serine protease HTRA2, mitochondrial

    See identical proteins and their annotated locations for NP_001271389.1

    Status: PROVISIONAL

    Source sequence(s)
    DQ138643
    UniProtKB/TrEMBL
    A0A8C0KK47, A0A8C0RNJ0, A0A8I3S3D5, A0A8P0PCD1, Q45FF7
    Related
    ENSCAFP00845025545.1, ENSCAFT00845032660.1
    Conserved Domains (1) summary
    TIGR02037
    Location:150453
    degP_htrA_DO; periplasmic serine protease, Do/DeqQ family

RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051821.1 Reference ROS_Cfam_1.0

    Range
    49469859..49472851 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049277.1 Alternate UMICH_Zoey_3.1

    Range
    48487009..48490000 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049758.1 Alternate UNSW_CanFamBas_1.0

    Range
    48553751..48556744 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049238.1 Alternate UU_Cfam_GSD_1.0

    Range
    49111429..49114422 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006599.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    48252304..48255295 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)