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AUP1 AUP1 lipid droplet regulating VLDL assembly factor [ Canis lupus familiaris (dog) ]

Gene ID: 475783, updated on 5-Mar-2024

Summary

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Official Symbol
AUP1provided by VGNC
Official Full Name
AUP1 lipid droplet regulating VLDL assembly factorprovided by VGNC
Primary source
VGNC:VGNC:38310
See related
Ensembl:ENSCAFG00845018596
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 17
Exon count:
12
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 17 NC_051821.1 (49472997..49476542)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 17 NC_006599.4 (48255441..48258987)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 17 NC_049238.1 (49114568..49118113)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 17 NC_049277.1 (48490146..48493692)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 17 NC_049758.1 (48556890..48560436)

Chromosome 17 - NC_051821.1Genomic Context describing neighboring genes Neighboring gene docking protein 1 Neighboring gene lysyl oxidase like 3 Neighboring gene HtrA serine peptidase 2 Neighboring gene DEAQ-box RNA dependent ATPase 1 Neighboring gene T cell leukemia homeobox 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ancient ubiquitous protein 1; LOW QUALITY PROTEIN: lipid droplet-regulating VLDL assembly factor AUP1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051821.1 Reference ROS_Cfam_1.0

    Range
    49472997..49476542
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038691642.1 → XP_038547570.1  LOW QUALITY PROTEIN: lipid droplet-regulating VLDL assembly factor AUP1

    UniProtKB/TrEMBL
    A0A8C0NSL0, A0A8I3PC21
    Related
    ENSCAFP00845025768.1, ENSCAFT00845032931.1
    Conserved Domains (2) summary
    cd14420
    Location:365 → 409
    CUE_AUP1; CUE domain found in ancient ubiquitous protein 1 (AUP1) and similar proteins
    cl17185
    Location:135 → 333
    LPLAT; Lysophospholipid acyltransferases (LPLATs) of glycerophospholipid biosynthesis

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049277.1 Alternate UMICH_Zoey_3.1

    Range
    48490146..48493692
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038499084.1 → XP_038355012.1  LOW QUALITY PROTEIN: lipid droplet-regulating VLDL assembly factor AUP1

    Conserved Domains (2) summary
    cd14420
    Location:365 → 409
    CUE_AUP1; CUE domain found in ancient ubiquitous protein 1 (AUP1) and similar proteins
    cl17185
    Location:135 → 333
    LPLAT; Lysophospholipid acyltransferases (LPLATs) of glycerophospholipid biosynthesis

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049758.1 Alternate UNSW_CanFamBas_1.0

    Range
    48556890..48560436
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038625713.1 → XP_038481641.1  LOW QUALITY PROTEIN: lipid droplet-regulating VLDL assembly factor AUP1

    Conserved Domains (2) summary
    cd14420
    Location:365 → 409
    CUE_AUP1; CUE domain found in ancient ubiquitous protein 1 (AUP1) and similar proteins
    cl17185
    Location:135 → 333
    LPLAT; Lysophospholipid acyltransferases (LPLATs) of glycerophospholipid biosynthesis

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049238.1 Alternate UU_Cfam_GSD_1.0

    Range
    49114568..49118113
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038561673.1 → XP_038417601.1  LOW QUALITY PROTEIN: lipid droplet-regulating VLDL assembly factor AUP1

    UniProtKB/TrEMBL
    A0A8C0NSL0, A0A8I3PC21
    Conserved Domains (2) summary
    cd14420
    Location:365 → 409
    CUE_AUP1; CUE domain found in ancient ubiquitous protein 1 (AUP1) and similar proteins
    cl17185
    Location:135 → 333
    LPLAT; Lysophospholipid acyltransferases (LPLATs) of glycerophospholipid biosynthesis

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006599.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    48255441..48258987
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_847497.6 → XP_852590.3  LOW QUALITY PROTEIN: lipid droplet-regulating VLDL assembly factor AUP1

    UniProtKB/TrEMBL
    A0A8C0NSL0, A0A8I3PC21
    Conserved Domains (2) summary
    cd14420
    Location:365 → 409
    CUE_AUP1; CUE domain found in ancient ubiquitous protein 1 (AUP1) and similar proteins
    cl17185
    Location:135 → 333
    LPLAT; Lysophospholipid acyltransferases (LPLATs) of glycerophospholipid biosynthesis
Nucleotide Protein
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