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CCDC60 coiled-coil domain containing 60 [ Canis lupus familiaris (dog) ]

Gene ID: 477504, updated on 17-Aug-2024

Summary

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Official Symbol
CCDC60provided by VGNC
Official Full Name
coiled-coil domain containing 60provided by VGNC
Primary source
VGNC:VGNC:38846
See related
Ensembl:ENSCAFG00845028864
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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See CCDC60 in Genome Data Viewer
Location:
chromosome: 26
Exon count:
20
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 26 NC_051830.1 (15723671..15896232)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 26 NC_006608.4 (15460676..15632782)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 26 NC_049247.1 (15802752..15974704)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 26 NC_049286.1 (15693509..15865572)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 26 NC_049767.1 (15761307..15933515)

Chromosome 26 - NC_051830.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC119866093 Neighboring gene uncharacterized LOC102155057 Neighboring gene transmembrane protein 233 Neighboring gene protein kinase AMP-activated non-catalytic subunit beta 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

General protein information

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Preferred Names
coiled-coil domain-containing protein 60

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051830.1 Reference ROS_Cfam_1.0

    Range
    15723671..15896232
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038436879.1 → XP_038292807.1  coiled-coil domain-containing protein 60 isoform X1

    UniProtKB/TrEMBL
    A0A8C0SZG4, A0A8I3PZV8
    Conserved Domains (1) summary
    pfam15769
    Location:57 → 600
    DUF4698; Domain of unknown function (DUF4698)

  2. XM_038436882.1 → XP_038292810.1  coiled-coil domain-containing protein 60 isoform X3

    UniProtKB/TrEMBL
    A0A8C0SZG4, A0A8I3PZV8
    Related
    ENSCAFP00845040040.1, ENSCAFT00845051075.1
    Conserved Domains (1) summary
    pfam15769
    Location:57 → 530
    DUF4698; Domain of unknown function (DUF4698)

  3. XM_038436884.1 → XP_038292812.1  coiled-coil domain-containing protein 60 isoform X4

    UniProtKB/TrEMBL
    A0A8C0SZG4, A0A8I3PXY7, A0A8I3PZV8, A0A8P0PPZ9
    Related
    ENSCAFP00845040048.1, ENSCAFT00845051083.1
    Conserved Domains (1) summary
    pfam15769
    Location:57 → 494
    DUF4698; Domain of unknown function (DUF4698)

  4. XM_038436880.1 → XP_038292808.1  coiled-coil domain-containing protein 60 isoform X1

    UniProtKB/TrEMBL
    A0A8C0SZG4, A0A8I3PZV8
    Conserved Domains (1) summary
    pfam15769
    Location:57 → 600
    DUF4698; Domain of unknown function (DUF4698)

  5. XM_038436881.1 → XP_038292809.1  coiled-coil domain-containing protein 60 isoform X2

    UniProtKB/TrEMBL
    A0A8C0SZG4, A0A8I3PZV8
    Conserved Domains (1) summary
    pfam15769
    Location:24 → 567
    DUF4698; Domain of unknown function (DUF4698)

RNA

  1. XR_005302415.1 RNA Sequence

  2. XR_005302416.1 RNA Sequence

  3. XR_005302418.1 RNA Sequence

  4. XR_005302417.1 RNA Sequence

  5. XR_005302419.1 RNA Sequence

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049286.1 Alternate UMICH_Zoey_3.1

    Range
    15693509..15865572
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038511772.1 → XP_038367700.1  coiled-coil domain-containing protein 60 isoform X3

    Conserved Domains (1) summary
    pfam15769
    Location:57 → 530
    DUF4698; Domain of unknown function (DUF4698)

  2. XM_038511773.1 → XP_038367701.1  coiled-coil domain-containing protein 60 isoform X4

    Conserved Domains (1) summary
    pfam15769
    Location:57 → 494
    DUF4698; Domain of unknown function (DUF4698)

  3. XM_038511770.1 → XP_038367698.1  coiled-coil domain-containing protein 60 isoform X1

    Conserved Domains (1) summary
    pfam15769
    Location:57 → 600
    DUF4698; Domain of unknown function (DUF4698)

  4. XM_038511771.1 → XP_038367699.1  coiled-coil domain-containing protein 60 isoform X2

    Conserved Domains (1) summary
    pfam15769
    Location:24 → 567
    DUF4698; Domain of unknown function (DUF4698)

RNA

  1. XR_005345513.1 RNA Sequence

  2. XR_005345514.1 RNA Sequence

  3. XR_005345516.1 RNA Sequence

  4. XR_005345515.1 RNA Sequence

  5. XR_005345517.1 RNA Sequence

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049767.1 Alternate UNSW_CanFamBas_1.0

    Range
    15761307..15933515
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038639458.1 → XP_038495386.1  coiled-coil domain-containing protein 60 isoform X1

    Conserved Domains (1) summary
    pfam15769
    Location:57 → 600
    DUF4698; Domain of unknown function (DUF4698)

  2. XM_038639461.1 → XP_038495389.1  coiled-coil domain-containing protein 60 isoform X3

    Conserved Domains (1) summary
    pfam15769
    Location:57 → 530
    DUF4698; Domain of unknown function (DUF4698)

  3. XM_038639462.1 → XP_038495390.1  coiled-coil domain-containing protein 60 isoform X4

    Conserved Domains (1) summary
    pfam15769
    Location:57 → 494
    DUF4698; Domain of unknown function (DUF4698)

  4. XM_038639459.1 → XP_038495387.1  coiled-coil domain-containing protein 60 isoform X1

    Conserved Domains (1) summary
    pfam15769
    Location:57 → 600
    DUF4698; Domain of unknown function (DUF4698)

  5. XM_038639460.1 → XP_038495388.1  coiled-coil domain-containing protein 60 isoform X2

    Conserved Domains (1) summary
    pfam15769
    Location:24 → 567
    DUF4698; Domain of unknown function (DUF4698)

RNA

  1. XR_005413081.1 RNA Sequence

  2. XR_005413082.1 RNA Sequence

  3. XR_005413084.1 RNA Sequence

  4. XR_005413083.1 RNA Sequence

  5. XR_005413085.1 RNA Sequence

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049247.1 Alternate UU_Cfam_GSD_1.0

    Range
    15802752..15974704
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038575270.1 → XP_038431198.1  coiled-coil domain-containing protein 60 isoform X1

    UniProtKB/TrEMBL
    A0A8C0SZG4, A0A8I3PZV8
    Conserved Domains (1) summary
    pfam15769
    Location:57 → 600
    DUF4698; Domain of unknown function (DUF4698)

  2. XM_038575273.1 → XP_038431201.1  coiled-coil domain-containing protein 60 isoform X3

    UniProtKB/TrEMBL
    A0A8C0SZG4, A0A8I3PZV8
    Conserved Domains (1) summary
    pfam15769
    Location:57 → 530
    DUF4698; Domain of unknown function (DUF4698)

  3. XM_038575274.1 → XP_038431202.1  coiled-coil domain-containing protein 60 isoform X4

    UniProtKB/TrEMBL
    A0A8C0SZG4, A0A8I3PXY7, A0A8I3PZV8, A0A8P0PPZ9
    Conserved Domains (1) summary
    pfam15769
    Location:57 → 494
    DUF4698; Domain of unknown function (DUF4698)

  4. XM_038575271.1 → XP_038431199.1  coiled-coil domain-containing protein 60 isoform X1

    UniProtKB/TrEMBL
    A0A8C0SZG4, A0A8I3PZV8
    Conserved Domains (1) summary
    pfam15769
    Location:57 → 600
    DUF4698; Domain of unknown function (DUF4698)

  5. XM_038575272.1 → XP_038431200.1  coiled-coil domain-containing protein 60 isoform X2

    UniProtKB/TrEMBL
    A0A8C0SZG4, A0A8I3PZV8
    Conserved Domains (1) summary
    pfam15769
    Location:24 → 567
    DUF4698; Domain of unknown function (DUF4698)

RNA

  1. XR_005379258.1 RNA Sequence

  2. XR_005379259.1 RNA Sequence

  3. XR_005379261.1 RNA Sequence

  4. XR_005379260.1 RNA Sequence

  5. XR_005379262.1 RNA Sequence

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006608.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    15460676..15632782
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022410449.2 → XP_022266157.1  coiled-coil domain-containing protein 60 isoform X1

    UniProtKB/TrEMBL
    A0A8C0SZG4, A0A8I3PZV8
    Conserved Domains (1) summary
    pfam15769
    Location:57 → 600
    DUF4698; Domain of unknown function (DUF4698)

  2. XM_038459185.1 → XP_038315113.1  coiled-coil domain-containing protein 60 isoform X3

    UniProtKB/TrEMBL
    A0A8C0SZG4, A0A8I3PZV8
    Conserved Domains (1) summary
    pfam15769
    Location:57 → 530
    DUF4698; Domain of unknown function (DUF4698)

  3. XM_038459186.1 → XP_038315114.1  coiled-coil domain-containing protein 60 isoform X4

    UniProtKB/TrEMBL
    A0A8C0SZG4, A0A8I3PXY7, A0A8I3PZV8, A0A8P0PPZ9
    Conserved Domains (1) summary
    pfam15769
    Location:57 → 494
    DUF4698; Domain of unknown function (DUF4698)

  4. XM_022410456.2 → XP_022266164.1  coiled-coil domain-containing protein 60 isoform X1

    UniProtKB/TrEMBL
    A0A8C0SZG4, A0A8I3PZV8
    Conserved Domains (1) summary
    pfam15769
    Location:57 → 600
    DUF4698; Domain of unknown function (DUF4698)

  5. XM_022410457.2 → XP_022266165.1  coiled-coil domain-containing protein 60 isoform X2

    UniProtKB/TrEMBL
    A0A8C0SZG4, A0A8I3PZV8
    Conserved Domains (1) summary
    pfam15769
    Location:24 → 567
    DUF4698; Domain of unknown function (DUF4698)

RNA

  1. XR_005314984.1 RNA Sequence

  2. XR_005314985.1 RNA Sequence

  3. XR_005314988.1 RNA Sequence

  4. XR_005314986.1 RNA Sequence

  5. XR_005314989.1 RNA Sequence

Nucleotide Protein
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