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CNOT3 CCR4-NOT transcription complex subunit 3 [ Homo sapiens (human) ]

Gene ID: 4849, updated on 27-Nov-2024

Summary

Official Symbol
CNOT3provided by HGNC
Official Full Name
CCR4-NOT transcription complex subunit 3provided by HGNC
Primary source
HGNC:HGNC:7879
See related
Ensembl:ENSG00000088038 MIM:604910; AllianceGenome:HGNC:7879
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
NOT3; LENG2; NOT3H; IDDSADF
Summary
Involved in regulation of stem cell population maintenance. Part of CCR4-NOT complex. [provided by Alliance of Genome Resources, Nov 2024]
Expression
Ubiquitous expression in testis (RPKM 13.9), spleen (RPKM 9.7) and 25 other tissues See more
Orthologs
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See CNOT3 in Genome Data Viewer
Location:
19q13.42
Exon count:
21
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 19 NC_000019.10 (54137762..54155681)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 19 NC_060943.1 (57217961..57235947)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 19 NC_000019.9 (54641478..54659419)

Chromosome 19 - NC_000019.10Genomic Context describing neighboring genes Neighboring gene NADH:ubiquinone oxidoreductase subunit A3 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr19:54617323-54618196 Neighboring gene TCF3 fusion partner Neighboring gene PRPF31 antisense RNA 1 Neighboring gene pre-mRNA processing factor 31 Neighboring gene uncharacterized LOC102724273 Neighboring gene H3K27ac hESC enhancer GRCh37_chr19:54662792-54663461 Neighboring gene leukocyte receptor cluster member 1 Neighboring gene transmembrane channel like 4 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr19:54676977-54677793 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr19:54677794-54678609 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr19:54683683-54684198 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr19:54684199-54684714 Neighboring gene membrane bound O-acyltransferase domain containing 7 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr19:54684715-54685229 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr19:54687509-54688008 Neighboring gene H3K27ac hESC enhancer GRCh37_chr19:54692762-54693444 Neighboring gene tRNA splicing endonuclease subunit 34

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Phenotypes

Associated conditions

Description Tests
Intellectual developmental disorder with speech delay, autism, and dysmorphic facies
MedGen: C5231456 OMIM: 618672 GeneReviews: Not available
Compare labs

Copy number response

Description
Copy number response
Haploinsufficency

No evidence available (Last evaluated 2018-06-27)

ClinGen Genome Curation Page
Triplosensitivity

No evidence available (Last evaluated 2018-06-27)

ClinGen Genome Curation Page

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Clone Names

  • KIAA0691

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Component Evidence Code Pubs
part_of CCR4-NOT complex IDA
Inferred from Direct Assay
more info
PubMed 
part_of CCR4-NOT complex NAS
Non-traceable Author Statement
more info
PubMed 
part_of CCR4-NOT core complex IBA
Inferred from Biological aspect of Ancestor
more info
 
is_active_in P-body IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in P-body ISS
Inferred from Sequence or Structural Similarity
more info
 
located_in cytosol TAS
Traceable Author Statement
more info
 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
CCR4-NOT transcription complex subunit 3
Names
CCR4-associated factor 3
NOT3 (negative regulator of transcription 3, yeast) homolog
leukocyte receptor cluster member 2

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_014516.4NP_055331.1  CCR4-NOT transcription complex subunit 3

    See identical proteins and their annotated locations for NP_055331.1

    Status: VALIDATED

    Source sequence(s)
    AC245052
    Consensus CDS
    CCDS12880.1
    UniProtKB/Swiss-Prot
    O75175, Q9NZN7, Q9UF76
    UniProtKB/TrEMBL
    B7Z6J7
    Related
    ENSP00000221232.5, ENST00000221232.11
    Conserved Domains (2) summary
    COG5665
    Location:12751
    COG5665; CCR4-NOT transcriptional regulation complex, NOT5 subunit [Transcription]
    pfam04065
    Location:3229
    Not3; Not1 N-terminal domain, CCR4-Not complex component

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000019.10 Reference GRCh38.p14 Primary Assembly

    Range
    54137762..54155681
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_047438877.1XP_047294833.1  CCR4-NOT transcription complex subunit 3 isoform X6

    UniProtKB/Swiss-Prot
    O75175, Q9NZN7, Q9UF76
  2. XM_047438878.1XP_047294834.1  CCR4-NOT transcription complex subunit 3 isoform X6

    UniProtKB/Swiss-Prot
    O75175, Q9NZN7, Q9UF76
  3. XM_047438866.1XP_047294822.1  CCR4-NOT transcription complex subunit 3 isoform X1

  4. XM_047438874.1XP_047294830.1  CCR4-NOT transcription complex subunit 3 isoform X5

  5. XM_047438879.1XP_047294835.1  CCR4-NOT transcription complex subunit 3 isoform X6

    UniProtKB/Swiss-Prot
    O75175, Q9NZN7, Q9UF76
  6. XM_005278280.3XP_005278337.1  CCR4-NOT transcription complex subunit 3 isoform X1

    See identical proteins and their annotated locations for XP_005278337.1

    UniProtKB/TrEMBL
    B7Z6J7
    Conserved Domains (2) summary
    COG5665
    Location:12769
    COG5665; CCR4-NOT transcriptional regulation complex, NOT5 subunit [Transcription]
    pfam04065
    Location:3230
    Not3; Not1 N-terminal domain, CCR4-Not complex component
  7. XM_047438872.1XP_047294828.1  CCR4-NOT transcription complex subunit 3 isoform X5

  8. XM_047438867.1XP_047294823.1  CCR4-NOT transcription complex subunit 3 isoform X2

  9. XM_047438875.1XP_047294831.1  CCR4-NOT transcription complex subunit 3 isoform X6

    UniProtKB/Swiss-Prot
    O75175, Q9NZN7, Q9UF76
    Related
    ENSP00000351159.4, ENST00000358389.7
  10. XM_005278279.3XP_005278336.1  CCR4-NOT transcription complex subunit 3 isoform X1

    See identical proteins and their annotated locations for XP_005278336.1

    UniProtKB/TrEMBL
    B7Z6J7
    Conserved Domains (2) summary
    COG5665
    Location:12769
    COG5665; CCR4-NOT transcriptional regulation complex, NOT5 subunit [Transcription]
    pfam04065
    Location:3230
    Not3; Not1 N-terminal domain, CCR4-Not complex component
  11. XM_005278282.4XP_005278339.1  CCR4-NOT transcription complex subunit 3 isoform X5

    See identical proteins and their annotated locations for XP_005278339.1

    UniProtKB/TrEMBL
    B7Z6J7
    Conserved Domains (2) summary
    COG5665
    Location:12752
    COG5665; CCR4-NOT transcriptional regulation complex, NOT5 subunit [Transcription]
    pfam04065
    Location:3230
    Not3; Not1 N-terminal domain, CCR4-Not complex component
  12. XM_005278281.3XP_005278338.1  CCR4-NOT transcription complex subunit 3 isoform X2

    See identical proteins and their annotated locations for XP_005278338.1

    UniProtKB/TrEMBL
    B7Z6J7
    Conserved Domains (2) summary
    COG5665
    Location:12768
    COG5665; CCR4-NOT transcriptional regulation complex, NOT5 subunit [Transcription]
    pfam04065
    Location:3229
    Not3; Not1 N-terminal domain, CCR4-Not complex component
  13. XM_047438869.1XP_047294825.1  CCR4-NOT transcription complex subunit 3 isoform X3

  14. XM_047438871.1XP_047294827.1  CCR4-NOT transcription complex subunit 3 isoform X4

  15. XM_047438880.1XP_047294836.1  CCR4-NOT transcription complex subunit 3 isoform X8

    Related
    ENSP00000496602.1, ENST00000617930.2
  16. XM_047438870.1XP_047294826.1  CCR4-NOT transcription complex subunit 3 isoform X4

  17. XM_011526993.4XP_011525295.1  CCR4-NOT transcription complex subunit 3 isoform X7

    See identical proteins and their annotated locations for XP_011525295.1

    UniProtKB/TrEMBL
    B7Z6J7
    Conserved Domains (2) summary
    pfam04065
    Location:3230
    Not3; Not1 N-terminal domain, CCR4-Not complex component
    cl02384
    Location:625678
    NOT2_3_5; NOT2 / NOT3 / NOT5 family
  18. XM_047438868.1XP_047294824.1  CCR4-NOT transcription complex subunit 3 isoform X2

  19. XM_047438873.1XP_047294829.1  CCR4-NOT transcription complex subunit 3 isoform X5

  20. XM_047438876.1XP_047294832.1  CCR4-NOT transcription complex subunit 3 isoform X6

    UniProtKB/Swiss-Prot
    O75175, Q9NZN7, Q9UF76

Reference GRCh38.p14 ALT_REF_LOCI_1

Genomic

  1. NW_003571054.1 Reference GRCh38.p14 ALT_REF_LOCI_1

    Range
    112518..130531
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054329698.1XP_054185673.1  CCR4-NOT transcription complex subunit 3 isoform X6

    UniProtKB/Swiss-Prot
    O75175, Q9NZN7, Q9UF76
  2. XM_054329685.1XP_054185660.1  CCR4-NOT transcription complex subunit 3 isoform X1

  3. XM_054329694.1XP_054185669.1  CCR4-NOT transcription complex subunit 3 isoform X5

  4. XM_054329687.1XP_054185662.1  CCR4-NOT transcription complex subunit 3 isoform X2

  5. XM_054329695.1XP_054185670.1  CCR4-NOT transcription complex subunit 3 isoform X6

    UniProtKB/Swiss-Prot
    O75175, Q9NZN7, Q9UF76
  6. XM_054329684.1XP_054185659.1  CCR4-NOT transcription complex subunit 3 isoform X1

  7. XM_054329693.1XP_054185668.1  CCR4-NOT transcription complex subunit 3 isoform X5

  8. XM_054329686.1XP_054185661.1  CCR4-NOT transcription complex subunit 3 isoform X2

  9. XM_054329690.1XP_054185665.1  CCR4-NOT transcription complex subunit 3 isoform X3

  10. XM_054329692.1XP_054185667.1  CCR4-NOT transcription complex subunit 3 isoform X4

  11. XM_054329689.1XP_054185664.1  CCR4-NOT transcription complex subunit 3 isoform X3

  12. XM_054329691.1XP_054185666.1  CCR4-NOT transcription complex subunit 3 isoform X4

  13. XM_054329699.1XP_054185674.1  CCR4-NOT transcription complex subunit 3 isoform X7

  14. XM_054329697.1XP_054185672.1  CCR4-NOT transcription complex subunit 3 isoform X6

    UniProtKB/Swiss-Prot
    O75175, Q9NZN7, Q9UF76
  15. XM_054329688.1XP_054185663.1  CCR4-NOT transcription complex subunit 3 isoform X2

  16. XM_054329696.1XP_054185671.1  CCR4-NOT transcription complex subunit 3 isoform X6

    UniProtKB/Swiss-Prot
    O75175, Q9NZN7, Q9UF76

Reference GRCh38.p14 ALT_REF_LOCI_2

Genomic

  1. NW_003571055.2 Reference GRCh38.p14 ALT_REF_LOCI_2

    Range
    112518..130532
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054330191.1XP_054186166.1  CCR4-NOT transcription complex subunit 3 isoform X5

  2. XM_054330195.1XP_054186170.1  CCR4-NOT transcription complex subunit 3 isoform X6

    UniProtKB/Swiss-Prot
    O75175, Q9NZN7, Q9UF76
  3. XM_054330181.1XP_054186156.1  CCR4-NOT transcription complex subunit 3 isoform X1

  4. XM_054330180.1XP_054186155.1  CCR4-NOT transcription complex subunit 3 isoform X1

  5. XM_054330189.1XP_054186164.1  CCR4-NOT transcription complex subunit 3 isoform X5

  6. XM_054330183.1XP_054186158.1  CCR4-NOT transcription complex subunit 3 isoform X2

  7. XM_054330192.1XP_054186167.1  CCR4-NOT transcription complex subunit 3 isoform X6

    UniProtKB/Swiss-Prot
    O75175, Q9NZN7, Q9UF76
  8. XM_054330179.1XP_054186154.1  CCR4-NOT transcription complex subunit 3 isoform X1

  9. XM_054330188.1XP_054186163.1  CCR4-NOT transcription complex subunit 3 isoform X5

  10. XM_054330182.1XP_054186157.1  CCR4-NOT transcription complex subunit 3 isoform X2

  11. XM_054330198.1XP_054186173.1  CCR4-NOT transcription complex subunit 3 isoform X8

  12. XM_054330187.1XP_054186162.1  CCR4-NOT transcription complex subunit 3 isoform X4

  13. XM_054330185.1XP_054186160.1  CCR4-NOT transcription complex subunit 3 isoform X3

  14. XM_054330197.1XP_054186172.1  CCR4-NOT transcription complex subunit 3 isoform X8

  15. XM_054330186.1XP_054186161.1  CCR4-NOT transcription complex subunit 3 isoform X4

  16. XM_054330196.1XP_054186171.1  CCR4-NOT transcription complex subunit 3 isoform X7

  17. XM_054330184.1XP_054186159.1  CCR4-NOT transcription complex subunit 3 isoform X2

  18. XM_054330190.1XP_054186165.1  CCR4-NOT transcription complex subunit 3 isoform X5

  19. XM_054330193.1XP_054186168.1  CCR4-NOT transcription complex subunit 3 isoform X6

    UniProtKB/Swiss-Prot
    O75175, Q9NZN7, Q9UF76
  20. XM_054330194.1XP_054186169.1  CCR4-NOT transcription complex subunit 3 isoform X6

    UniProtKB/Swiss-Prot
    O75175, Q9NZN7, Q9UF76

Reference GRCh38.p14 ALT_REF_LOCI_3

Genomic

  1. NW_003571056.2 Reference GRCh38.p14 ALT_REF_LOCI_3

    Range
    112518..130532
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054330492.1XP_054186467.1  CCR4-NOT transcription complex subunit 3 isoform X6

    UniProtKB/Swiss-Prot
    O75175, Q9NZN7, Q9UF76
  2. XM_054330478.1XP_054186453.1  CCR4-NOT transcription complex subunit 3 isoform X1

  3. XM_054330477.1XP_054186452.1  CCR4-NOT transcription complex subunit 3 isoform X1

  4. XM_054330487.1XP_054186462.1  CCR4-NOT transcription complex subunit 3 isoform X5

  5. XM_054330480.1XP_054186455.1  CCR4-NOT transcription complex subunit 3 isoform X2

  6. XM_054330490.1XP_054186465.1  CCR4-NOT transcription complex subunit 3 isoform X6

    UniProtKB/Swiss-Prot
    O75175, Q9NZN7, Q9UF76
  7. XM_054330476.1XP_054186451.1  CCR4-NOT transcription complex subunit 3 isoform X1

  8. XM_054330486.1XP_054186461.1  CCR4-NOT transcription complex subunit 3 isoform X5

  9. XM_054330479.1XP_054186454.1  CCR4-NOT transcription complex subunit 3 isoform X2

  10. XM_054330496.1XP_054186471.1  CCR4-NOT transcription complex subunit 3 isoform X8

  11. XM_054330485.1XP_054186460.1  CCR4-NOT transcription complex subunit 3 isoform X4

  12. XM_054330483.1XP_054186458.1  CCR4-NOT transcription complex subunit 3 isoform X3

  13. XM_054330495.1XP_054186470.1  CCR4-NOT transcription complex subunit 3 isoform X8

  14. XM_054330484.1XP_054186459.1  CCR4-NOT transcription complex subunit 3 isoform X4

  15. XM_054330494.1XP_054186469.1  CCR4-NOT transcription complex subunit 3 isoform X7

  16. XM_054330481.1XP_054186456.1  CCR4-NOT transcription complex subunit 3 isoform X2

  17. XM_054330488.1XP_054186463.1  CCR4-NOT transcription complex subunit 3 isoform X5

  18. XM_054330491.1XP_054186466.1  CCR4-NOT transcription complex subunit 3 isoform X6

    UniProtKB/Swiss-Prot
    O75175, Q9NZN7, Q9UF76
  19. XM_054330482.1XP_054186457.1  CCR4-NOT transcription complex subunit 3 isoform X2

  20. XM_054330489.1XP_054186464.1  CCR4-NOT transcription complex subunit 3 isoform X5

  21. XM_054330493.1XP_054186468.1  CCR4-NOT transcription complex subunit 3 isoform X9

Reference GRCh38.p14 ALT_REF_LOCI_4

Genomic

  1. NW_003571057.2 Reference GRCh38.p14 ALT_REF_LOCI_4

    Range
    112518..130532
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054330739.1XP_054186714.1  CCR4-NOT transcription complex subunit 3 isoform X5

  2. XM_054330743.1XP_054186718.1  CCR4-NOT transcription complex subunit 3 isoform X6

    UniProtKB/Swiss-Prot
    O75175, Q9NZN7, Q9UF76
  3. XM_054330729.1XP_054186704.1  CCR4-NOT transcription complex subunit 3 isoform X1

  4. XM_054330737.1XP_054186712.1  CCR4-NOT transcription complex subunit 3 isoform X5

  5. XM_054330731.1XP_054186706.1  CCR4-NOT transcription complex subunit 3 isoform X2

  6. XM_054330740.1XP_054186715.1  CCR4-NOT transcription complex subunit 3 isoform X6

    UniProtKB/Swiss-Prot
    O75175, Q9NZN7, Q9UF76
  7. XM_054330728.1XP_054186703.1  CCR4-NOT transcription complex subunit 3 isoform X1

  8. XM_054330736.1XP_054186711.1  CCR4-NOT transcription complex subunit 3 isoform X5

  9. XM_054330730.1XP_054186705.1  CCR4-NOT transcription complex subunit 3 isoform X2

  10. XM_054330745.1XP_054186720.1  CCR4-NOT transcription complex subunit 3 isoform X8

  11. XM_054330734.1XP_054186709.1  CCR4-NOT transcription complex subunit 3 isoform X3

  12. XM_054330735.1XP_054186710.1  CCR4-NOT transcription complex subunit 3 isoform X4

  13. XM_054330744.1XP_054186719.1  CCR4-NOT transcription complex subunit 3 isoform X7

  14. XM_054330732.1XP_054186707.1  CCR4-NOT transcription complex subunit 3 isoform X2

  15. XM_054330738.1XP_054186713.1  CCR4-NOT transcription complex subunit 3 isoform X5

  16. XM_054330742.1XP_054186717.1  CCR4-NOT transcription complex subunit 3 isoform X6

    UniProtKB/Swiss-Prot
    O75175, Q9NZN7, Q9UF76
  17. XM_054330733.1XP_054186708.1  CCR4-NOT transcription complex subunit 3 isoform X2

  18. XM_054330741.1XP_054186716.1  CCR4-NOT transcription complex subunit 3 isoform X6

    UniProtKB/Swiss-Prot
    O75175, Q9NZN7, Q9UF76

Reference GRCh38.p14 ALT_REF_LOCI_5

Genomic

  1. NW_003571058.2 Reference GRCh38.p14 ALT_REF_LOCI_5

    Range
    112518..130532
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054330969.1XP_054186944.1  CCR4-NOT transcription complex subunit 3 isoform X5

  2. XM_054330971.1XP_054186946.1  CCR4-NOT transcription complex subunit 3 isoform X6

    UniProtKB/Swiss-Prot
    O75175, Q9NZN7, Q9UF76
  3. XM_054330960.1XP_054186935.1  CCR4-NOT transcription complex subunit 3 isoform X1

  4. XM_054330967.1XP_054186942.1  CCR4-NOT transcription complex subunit 3 isoform X5

  5. XM_054330962.1XP_054186937.1  CCR4-NOT transcription complex subunit 3 isoform X2

  6. XM_054330970.1XP_054186945.1  CCR4-NOT transcription complex subunit 3 isoform X6

    UniProtKB/Swiss-Prot
    O75175, Q9NZN7, Q9UF76
  7. XM_054330959.1XP_054186934.1  CCR4-NOT transcription complex subunit 3 isoform X1

  8. XM_054330966.1XP_054186941.1  CCR4-NOT transcription complex subunit 3 isoform X5

  9. XM_054330961.1XP_054186936.1  CCR4-NOT transcription complex subunit 3 isoform X2

  10. XM_054330976.1XP_054186951.1  CCR4-NOT transcription complex subunit 3 isoform X8

  11. XM_054330964.1XP_054186939.1  CCR4-NOT transcription complex subunit 3 isoform X3

  12. XM_054330975.1XP_054186950.1  CCR4-NOT transcription complex subunit 3 isoform X8

  13. XM_054330965.1XP_054186940.1  CCR4-NOT transcription complex subunit 3 isoform X4

  14. XM_054330974.1XP_054186949.1  CCR4-NOT transcription complex subunit 3 isoform X7

  15. XM_054330968.1XP_054186943.1  CCR4-NOT transcription complex subunit 3 isoform X5

  16. XM_054330973.1XP_054186948.1  CCR4-NOT transcription complex subunit 3 isoform X6

    UniProtKB/Swiss-Prot
    O75175, Q9NZN7, Q9UF76
  17. XM_054330963.1XP_054186938.1  CCR4-NOT transcription complex subunit 3 isoform X2

  18. XM_054330972.1XP_054186947.1  CCR4-NOT transcription complex subunit 3 isoform X6

    UniProtKB/Swiss-Prot
    O75175, Q9NZN7, Q9UF76

Reference GRCh38.p14 ALT_REF_LOCI_6

Genomic

  1. NW_003571059.2 Reference GRCh38.p14 ALT_REF_LOCI_6

    Range
    112518..130532
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054331252.1XP_054187227.1  CCR4-NOT transcription complex subunit 3 isoform X5

  2. XM_054331254.1XP_054187229.1  CCR4-NOT transcription complex subunit 3 isoform X6

    UniProtKB/Swiss-Prot
    O75175, Q9NZN7, Q9UF76
  3. XM_054331242.1XP_054187217.1  CCR4-NOT transcription complex subunit 3 isoform X1

  4. XM_054331241.1XP_054187216.1  CCR4-NOT transcription complex subunit 3 isoform X1

  5. XM_054331251.1XP_054187226.1  CCR4-NOT transcription complex subunit 3 isoform X5

  6. XM_054331244.1XP_054187219.1  CCR4-NOT transcription complex subunit 3 isoform X2

  7. XM_054331253.1XP_054187228.1  CCR4-NOT transcription complex subunit 3 isoform X6

    UniProtKB/Swiss-Prot
    O75175, Q9NZN7, Q9UF76
  8. XM_054331240.1XP_054187215.1  CCR4-NOT transcription complex subunit 3 isoform X1

  9. XM_054331250.1XP_054187225.1  CCR4-NOT transcription complex subunit 3 isoform X5

  10. XM_054331243.1XP_054187218.1  CCR4-NOT transcription complex subunit 3 isoform X2

  11. XM_054331259.1XP_054187234.1  CCR4-NOT transcription complex subunit 3 isoform X8

  12. XM_054331249.1XP_054187224.1  CCR4-NOT transcription complex subunit 3 isoform X4

  13. XM_054331247.1XP_054187222.1  CCR4-NOT transcription complex subunit 3 isoform X3

  14. XM_054331258.1XP_054187233.1  CCR4-NOT transcription complex subunit 3 isoform X8

  15. XM_054331248.1XP_054187223.1  CCR4-NOT transcription complex subunit 3 isoform X4

  16. XM_054331257.1XP_054187232.1  CCR4-NOT transcription complex subunit 3 isoform X7

  17. XM_054331245.1XP_054187220.1  CCR4-NOT transcription complex subunit 3 isoform X2

  18. XM_054331255.1XP_054187230.1  CCR4-NOT transcription complex subunit 3 isoform X6

    UniProtKB/Swiss-Prot
    O75175, Q9NZN7, Q9UF76
  19. XM_054331246.1XP_054187221.1  CCR4-NOT transcription complex subunit 3 isoform X2

  20. XM_054331256.1XP_054187231.1  CCR4-NOT transcription complex subunit 3 isoform X10

Reference GRCh38.p14 ALT_REF_LOCI_7

Genomic

  1. NW_003571060.1 Reference GRCh38.p14 ALT_REF_LOCI_7

    Range
    112518..130532
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054331525.1XP_054187500.1  CCR4-NOT transcription complex subunit 3 isoform X5

  2. XM_054331528.1XP_054187503.1  CCR4-NOT transcription complex subunit 3 isoform X6

    UniProtKB/Swiss-Prot
    O75175, Q9NZN7, Q9UF76
  3. XM_054331517.1XP_054187492.1  CCR4-NOT transcription complex subunit 3 isoform X1

  4. XM_054331516.1XP_054187491.1  CCR4-NOT transcription complex subunit 3 isoform X1

  5. XM_054331523.1XP_054187498.1  CCR4-NOT transcription complex subunit 3 isoform X5

  6. XM_054331519.1XP_054187494.1  CCR4-NOT transcription complex subunit 3 isoform X2

  7. XM_054331526.1XP_054187501.1  CCR4-NOT transcription complex subunit 3 isoform X6

    UniProtKB/Swiss-Prot
    O75175, Q9NZN7, Q9UF76
  8. XM_054331515.1XP_054187490.1  CCR4-NOT transcription complex subunit 3 isoform X1

  9. XM_054331522.1XP_054187497.1  CCR4-NOT transcription complex subunit 3 isoform X5

  10. XM_054331518.1XP_054187493.1  CCR4-NOT transcription complex subunit 3 isoform X2

  11. XM_054331520.1XP_054187495.1  CCR4-NOT transcription complex subunit 3 isoform X3

  12. XM_054331521.1XP_054187496.1  CCR4-NOT transcription complex subunit 3 isoform X4

  13. XM_054331529.1XP_054187504.1  CCR4-NOT transcription complex subunit 3 isoform X7

  14. XM_054331524.1XP_054187499.1  CCR4-NOT transcription complex subunit 3 isoform X5

  15. XM_054331527.1XP_054187502.1  CCR4-NOT transcription complex subunit 3 isoform X6

    UniProtKB/Swiss-Prot
    O75175, Q9NZN7, Q9UF76

Reference GRCh38.p14 ALT_REF_LOCI_8

Genomic

  1. NW_003571061.2 Reference GRCh38.p14 ALT_REF_LOCI_8

    Range
    112518..130532
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054333570.1XP_054189545.1  CCR4-NOT transcription complex subunit 3 isoform X6

    UniProtKB/Swiss-Prot
    O75175, Q9NZN7, Q9UF76
  2. XM_054333556.1XP_054189531.1  CCR4-NOT transcription complex subunit 3 isoform X1

  3. XM_054333565.1XP_054189540.1  CCR4-NOT transcription complex subunit 3 isoform X5

  4. XM_054333558.1XP_054189533.1  CCR4-NOT transcription complex subunit 3 isoform X2

  5. XM_054333568.1XP_054189543.1  CCR4-NOT transcription complex subunit 3 isoform X6

    UniProtKB/Swiss-Prot
    O75175, Q9NZN7, Q9UF76
  6. XM_054333555.1XP_054189530.1  CCR4-NOT transcription complex subunit 3 isoform X1

  7. XM_054333564.1XP_054189539.1  CCR4-NOT transcription complex subunit 3 isoform X5

  8. XM_054333557.1XP_054189532.1  CCR4-NOT transcription complex subunit 3 isoform X2

  9. XM_054333563.1XP_054189538.1  CCR4-NOT transcription complex subunit 3 isoform X4

  10. XM_054333561.1XP_054189536.1  CCR4-NOT transcription complex subunit 3 isoform X3

  11. XM_054333573.1XP_054189548.1  CCR4-NOT transcription complex subunit 3 isoform X8

  12. XM_054333562.1XP_054189537.1  CCR4-NOT transcription complex subunit 3 isoform X4

  13. XM_054333572.1XP_054189547.1  CCR4-NOT transcription complex subunit 3 isoform X7

  14. XM_054333559.1XP_054189534.1  CCR4-NOT transcription complex subunit 3 isoform X2

  15. XM_054333566.1XP_054189541.1  CCR4-NOT transcription complex subunit 3 isoform X5

  16. XM_054333571.1XP_054189546.1  CCR4-NOT transcription complex subunit 3 isoform X6

    UniProtKB/Swiss-Prot
    O75175, Q9NZN7, Q9UF76
  17. XM_054333560.1XP_054189535.1  CCR4-NOT transcription complex subunit 3 isoform X2

  18. XM_054333567.1XP_054189542.1  CCR4-NOT transcription complex subunit 3 isoform X5

  19. XM_054333569.1XP_054189544.1  CCR4-NOT transcription complex subunit 3 isoform X6

    UniProtKB/Swiss-Prot
    O75175, Q9NZN7, Q9UF76

Reference GRCh38.p14 ALT_REF_LOCI_9

Genomic

  1. NT_187693.1 Reference GRCh38.p14 ALT_REF_LOCI_9

    Range
    112518..130532
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054333668.1XP_054189643.1  CCR4-NOT transcription complex subunit 3 isoform X5

  2. XM_054333671.1XP_054189646.1  CCR4-NOT transcription complex subunit 3 isoform X6

    UniProtKB/Swiss-Prot
    O75175, Q9NZN7, Q9UF76
  3. XM_054333658.1XP_054189633.1  CCR4-NOT transcription complex subunit 3 isoform X1

  4. XM_054333656.1XP_054189631.1  CCR4-NOT transcription complex subunit 3 isoform X1

  5. XM_054333666.1XP_054189641.1  CCR4-NOT transcription complex subunit 3 isoform X5

  6. XM_054333660.1XP_054189635.1  CCR4-NOT transcription complex subunit 3 isoform X2

  7. XM_054333669.1XP_054189644.1  CCR4-NOT transcription complex subunit 3 isoform X6

    UniProtKB/Swiss-Prot
    O75175, Q9NZN7, Q9UF76
  8. XM_054333657.1XP_054189632.1  CCR4-NOT transcription complex subunit 3 isoform X1

  9. XM_054333665.1XP_054189640.1  CCR4-NOT transcription complex subunit 3 isoform X5

  10. XM_054333659.1XP_054189634.1  CCR4-NOT transcription complex subunit 3 isoform X2

  11. XM_054333675.1XP_054189650.1  CCR4-NOT transcription complex subunit 3 isoform X8

  12. XM_054333664.1XP_054189639.1  CCR4-NOT transcription complex subunit 3 isoform X4

  13. XM_054333662.1XP_054189637.1  CCR4-NOT transcription complex subunit 3 isoform X3

  14. XM_054333674.1XP_054189649.1  CCR4-NOT transcription complex subunit 3 isoform X8

  15. XM_054333663.1XP_054189638.1  CCR4-NOT transcription complex subunit 3 isoform X4

  16. XM_054333673.1XP_054189648.1  CCR4-NOT transcription complex subunit 3 isoform X7

  17. XM_054333661.1XP_054189636.1  CCR4-NOT transcription complex subunit 3 isoform X2

  18. XM_054333667.1XP_054189642.1  CCR4-NOT transcription complex subunit 3 isoform X5

  19. XM_054333672.1XP_054189647.1  CCR4-NOT transcription complex subunit 3 isoform X6

    UniProtKB/Swiss-Prot
    O75175, Q9NZN7, Q9UF76
  20. XM_054333670.1XP_054189645.1  CCR4-NOT transcription complex subunit 3 isoform X6

    UniProtKB/Swiss-Prot
    O75175, Q9NZN7, Q9UF76

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060943.1 Alternate T2T-CHM13v2.0

    Range
    57217961..57235947
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054321095.1XP_054177070.1  CCR4-NOT transcription complex subunit 3 isoform X5

  2. XM_054321098.1XP_054177073.1  CCR4-NOT transcription complex subunit 3 isoform X6

    UniProtKB/Swiss-Prot
    O75175, Q9NZN7, Q9UF76
  3. XM_054321099.1XP_054177074.1  CCR4-NOT transcription complex subunit 3 isoform X6

    UniProtKB/Swiss-Prot
    O75175, Q9NZN7, Q9UF76
  4. XM_054321082.1XP_054177057.1  CCR4-NOT transcription complex subunit 3 isoform X1

  5. XM_054321094.1XP_054177069.1  CCR4-NOT transcription complex subunit 3 isoform X5

  6. XM_054321100.1XP_054177075.1  CCR4-NOT transcription complex subunit 3 isoform X6

    UniProtKB/Swiss-Prot
    O75175, Q9NZN7, Q9UF76
  7. XM_054321081.1XP_054177056.1  CCR4-NOT transcription complex subunit 3 isoform X1

  8. XM_054321092.1XP_054177067.1  CCR4-NOT transcription complex subunit 3 isoform X5

  9. XM_054321084.1XP_054177059.1  CCR4-NOT transcription complex subunit 3 isoform X2

  10. XM_054321096.1XP_054177071.1  CCR4-NOT transcription complex subunit 3 isoform X6

    UniProtKB/Swiss-Prot
    O75175, Q9NZN7, Q9UF76
  11. XM_054321080.1XP_054177055.1  CCR4-NOT transcription complex subunit 3 isoform X1

  12. XM_054321091.1XP_054177066.1  CCR4-NOT transcription complex subunit 3 isoform X5

  13. XM_054321083.1XP_054177058.1  CCR4-NOT transcription complex subunit 3 isoform X2

  14. XM_054321088.1XP_054177063.1  CCR4-NOT transcription complex subunit 3 isoform X3

  15. XM_054321103.1XP_054177078.1  CCR4-NOT transcription complex subunit 3 isoform X8

  16. XM_054321090.1XP_054177065.1  CCR4-NOT transcription complex subunit 3 isoform X4

  17. XM_054321087.1XP_054177062.1  CCR4-NOT transcription complex subunit 3 isoform X3

  18. XM_054321102.1XP_054177077.1  CCR4-NOT transcription complex subunit 3 isoform X8

  19. XM_054321089.1XP_054177064.1  CCR4-NOT transcription complex subunit 3 isoform X4

  20. XM_054321101.1XP_054177076.1  CCR4-NOT transcription complex subunit 3 isoform X7

  21. XM_054321085.1XP_054177060.1  CCR4-NOT transcription complex subunit 3 isoform X2

  22. XM_054321093.1XP_054177068.1  CCR4-NOT transcription complex subunit 3 isoform X5

  23. XM_054321097.1XP_054177072.1  CCR4-NOT transcription complex subunit 3 isoform X6

    UniProtKB/Swiss-Prot
    O75175, Q9NZN7, Q9UF76
  24. XM_054321086.1XP_054177061.1  CCR4-NOT transcription complex subunit 3 isoform X2