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ESRRB estrogen related receptor beta [ Canis lupus familiaris (dog) ]

Gene ID: 490798, updated on 17-Aug-2024

Summary

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Official Symbol
ESRRBprovided by VGNC
Official Full Name
estrogen related receptor betaprovided by VGNC
Primary source
VGNC:VGNC:40480
See related
Ensembl:ENSCAFG00845005665
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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See ESRRB in Genome Data Viewer
Location:
chromosome: 8
Exon count:
10
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 8 NC_051812.1 (49536327..49651095)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 8 NC_006590.4 (48993759..49108098)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 8 NC_049229.1 (49627923..49742343)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 8 NC_049268.1 (49207343..49321606)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 8 NC_049749.1 (49229899..49344297)

Chromosome 8 - NC_051812.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111097114 Neighboring gene uncharacterized LOC119873005 Neighboring gene uncharacterized LOC119872906 Neighboring gene 40S ribosomal protein S20-like Neighboring gene uncharacterized LOC111097116 Neighboring gene uncharacterized LOC111097115

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nuclear steroid receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables steroid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
steroid hormone receptor ERR2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051812.1 Reference ROS_Cfam_1.0

    Range
    49536327..49651095
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038674276.1 → XP_038530204.1  steroid hormone receptor ERR2 isoform X4

    UniProtKB/TrEMBL
    A0A8C0JJR6, A0A8C0ND34, A0A8I3MPU9
    Related
    ENSCAFP00845007836.1, ENSCAFT00845010042.1
    Conserved Domains (2) summary
    cd06946
    Location:212 → 431
    NR_LBD_ERR; The ligand binding domain of estrogen receptor-related nuclear receptors
    cd07170
    Location:98 → 193
    NR_DBD_ERR; DNA-binding domain of estrogen related receptors (ERR) is composed of two C4-type zinc fingers

  2. XM_038674274.1 → XP_038530202.1  steroid hormone receptor ERR2 isoform X2

    UniProtKB/TrEMBL
    A0A8C0JLU1, A0A8C0N8Z3, A0A8C0STA1, A0A8I3MU60
    Related
    ENSCAFP00845007862.1, ENSCAFT00845010080.1
    Conserved Domains (2) summary
    cd06946
    Location:233 → 452
    NR_LBD_ERR; The ligand binding domain of estrogen receptor-related nuclear receptors
    cd07170
    Location:119 → 214
    NR_DBD_ERR; DNA-binding domain of estrogen related receptors (ERR) is composed of two C4-type zinc fingers

  3. XM_038674273.1 → XP_038530201.1  steroid hormone receptor ERR2 isoform X1

    UniProtKB/TrEMBL
    A0A8C0JJR6, A0A8C0ND34, A0A8I3MPU9
    Conserved Domains (2) summary
    cd06946
    Location:292 → 511
    NR_LBD_ERR; The ligand binding domain of estrogen receptor-related nuclear receptors
    cd07170
    Location:178 → 273
    NR_DBD_ERR; DNA-binding domain of estrogen related receptors (ERR) is composed of two C4-type zinc fingers

  4. XM_038674275.1 → XP_038530203.1  steroid hormone receptor ERR2 isoform X3

    UniProtKB/TrEMBL
    A0A8C0JJR6, A0A8C0ND34, A0A8I3MPU9, A0A8I3N0S3, A0A8P0NXD0
    Related
    ENSCAFP00845007871.1, ENSCAFT00845010091.1
    Conserved Domains (2) summary
    cd06946
    Location:228 → 447
    NR_LBD_ERR; The ligand binding domain of estrogen receptor-related nuclear receptors
    cd07170
    Location:114 → 209
    NR_DBD_ERR; DNA-binding domain of estrogen related receptors (ERR) is composed of two C4-type zinc fingers

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049268.1 Alternate UMICH_Zoey_3.1

    Range
    49207343..49321606
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038483874.1 → XP_038339802.1  steroid hormone receptor ERR2 isoform X4

    Conserved Domains (2) summary
    cd06946
    Location:212 → 431
    NR_LBD_ERR; The ligand binding domain of estrogen receptor-related nuclear receptors
    cd07170
    Location:98 → 193
    NR_DBD_ERR; DNA-binding domain of estrogen related receptors (ERR) is composed of two C4-type zinc fingers

  2. XM_038483872.1 → XP_038339800.1  steroid hormone receptor ERR2 isoform X2

    Conserved Domains (2) summary
    cd06946
    Location:233 → 452
    NR_LBD_ERR; The ligand binding domain of estrogen receptor-related nuclear receptors
    cd07170
    Location:119 → 214
    NR_DBD_ERR; DNA-binding domain of estrogen related receptors (ERR) is composed of two C4-type zinc fingers

  3. XM_038483871.1 → XP_038339799.1  steroid hormone receptor ERR2 isoform X1

    Conserved Domains (2) summary
    cd06946
    Location:292 → 511
    NR_LBD_ERR; The ligand binding domain of estrogen receptor-related nuclear receptors
    cd07170
    Location:178 → 273
    NR_DBD_ERR; DNA-binding domain of estrogen related receptors (ERR) is composed of two C4-type zinc fingers

  4. XM_038483873.1 → XP_038339801.1  steroid hormone receptor ERR2 isoform X3

    Conserved Domains (2) summary
    cd06946
    Location:228 → 447
    NR_LBD_ERR; The ligand binding domain of estrogen receptor-related nuclear receptors
    cd07170
    Location:114 → 209
    NR_DBD_ERR; DNA-binding domain of estrogen related receptors (ERR) is composed of two C4-type zinc fingers

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049749.1 Alternate UNSW_CanFamBas_1.0

    Range
    49229899..49344297
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038609453.1 → XP_038465381.1  steroid hormone receptor ERR2 isoform X4

    Conserved Domains (2) summary
    cd06946
    Location:212 → 431
    NR_LBD_ERR; The ligand binding domain of estrogen receptor-related nuclear receptors
    cd07170
    Location:98 → 193
    NR_DBD_ERR; DNA-binding domain of estrogen related receptors (ERR) is composed of two C4-type zinc fingers

  2. XM_038609451.1 → XP_038465379.1  steroid hormone receptor ERR2 isoform X2

    Conserved Domains (2) summary
    cd06946
    Location:233 → 452
    NR_LBD_ERR; The ligand binding domain of estrogen receptor-related nuclear receptors
    cd07170
    Location:119 → 214
    NR_DBD_ERR; DNA-binding domain of estrogen related receptors (ERR) is composed of two C4-type zinc fingers

  3. XM_038609450.1 → XP_038465378.1  steroid hormone receptor ERR2 isoform X1

    Conserved Domains (2) summary
    cd06946
    Location:292 → 511
    NR_LBD_ERR; The ligand binding domain of estrogen receptor-related nuclear receptors
    cd07170
    Location:178 → 273
    NR_DBD_ERR; DNA-binding domain of estrogen related receptors (ERR) is composed of two C4-type zinc fingers

  4. XM_038609452.1 → XP_038465380.1  steroid hormone receptor ERR2 isoform X3

    Conserved Domains (2) summary
    cd06946
    Location:228 → 447
    NR_LBD_ERR; The ligand binding domain of estrogen receptor-related nuclear receptors
    cd07170
    Location:114 → 209
    NR_DBD_ERR; DNA-binding domain of estrogen related receptors (ERR) is composed of two C4-type zinc fingers

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049229.1 Alternate UU_Cfam_GSD_1.0

    Range
    49627923..49742343
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038545354.1 → XP_038401282.1  steroid hormone receptor ERR2 isoform X4

    UniProtKB/TrEMBL
    A0A8C0JJR6, A0A8C0ND34, A0A8I3MPU9
    Conserved Domains (2) summary
    cd06946
    Location:212 → 431
    NR_LBD_ERR; The ligand binding domain of estrogen receptor-related nuclear receptors
    cd07170
    Location:98 → 193
    NR_DBD_ERR; DNA-binding domain of estrogen related receptors (ERR) is composed of two C4-type zinc fingers

  2. XM_038545352.1 → XP_038401280.1  steroid hormone receptor ERR2 isoform X2

    UniProtKB/TrEMBL
    A0A8C0JLU1, A0A8C0N8Z3, A0A8C0STA1, A0A8I3MU60
    Conserved Domains (2) summary
    cd06946
    Location:233 → 452
    NR_LBD_ERR; The ligand binding domain of estrogen receptor-related nuclear receptors
    cd07170
    Location:119 → 214
    NR_DBD_ERR; DNA-binding domain of estrogen related receptors (ERR) is composed of two C4-type zinc fingers

  3. XM_038545351.1 → XP_038401279.1  steroid hormone receptor ERR2 isoform X1

    UniProtKB/TrEMBL
    A0A8C0JJR6, A0A8C0ND34, A0A8I3MPU9
    Conserved Domains (2) summary
    cd06946
    Location:292 → 511
    NR_LBD_ERR; The ligand binding domain of estrogen receptor-related nuclear receptors
    cd07170
    Location:178 → 273
    NR_DBD_ERR; DNA-binding domain of estrogen related receptors (ERR) is composed of two C4-type zinc fingers

  4. XM_038545353.1 → XP_038401281.1  steroid hormone receptor ERR2 isoform X3

    UniProtKB/TrEMBL
    A0A8C0JJR6, A0A8C0ND34, A0A8I3MPU9, A0A8I3N0S3, A0A8P0NXD0
    Conserved Domains (2) summary
    cd06946
    Location:228 → 447
    NR_LBD_ERR; The ligand binding domain of estrogen receptor-related nuclear receptors
    cd07170
    Location:114 → 209
    NR_DBD_ERR; DNA-binding domain of estrogen related receptors (ERR) is composed of two C4-type zinc fingers

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006590.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    48993759..49108098
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038592006.1 → XP_038447934.1  steroid hormone receptor ERR2 isoform X4

    UniProtKB/TrEMBL
    A0A8C0JJR6, A0A8C0ND34, A0A8I3MPU9
    Conserved Domains (2) summary
    cd06946
    Location:212 → 431
    NR_LBD_ERR; The ligand binding domain of estrogen receptor-related nuclear receptors
    cd07170
    Location:98 → 193
    NR_DBD_ERR; DNA-binding domain of estrogen related receptors (ERR) is composed of two C4-type zinc fingers

  2. XM_547920.7 → XP_547920.4  steroid hormone receptor ERR2 isoform X2

    UniProtKB/TrEMBL
    A0A8C0JLU1, A0A8C0N8Z3, A0A8C0STA1, A0A8I3MU60
    Conserved Domains (2) summary
    cd06946
    Location:233 → 452
    NR_LBD_ERR; The ligand binding domain of estrogen receptor-related nuclear receptors
    cd07170
    Location:119 → 214
    NR_DBD_ERR; DNA-binding domain of estrogen related receptors (ERR) is composed of two C4-type zinc fingers

  3. XM_038591983.1 → XP_038447911.1  steroid hormone receptor ERR2 isoform X1

    UniProtKB/TrEMBL
    A0A8C0JJR6, A0A8C0ND34, A0A8I3MPU9
    Conserved Domains (2) summary
    cd06946
    Location:292 → 511
    NR_LBD_ERR; The ligand binding domain of estrogen receptor-related nuclear receptors
    cd07170
    Location:178 → 273
    NR_DBD_ERR; DNA-binding domain of estrogen related receptors (ERR) is composed of two C4-type zinc fingers

  4. XM_022422244.2 → XP_022277952.1  steroid hormone receptor ERR2 isoform X3

    UniProtKB/TrEMBL
    A0A8C0JJR6, A0A8C0ND34, A0A8I3MPU9, A0A8I3N0S3, A0A8P0NXD0
    Conserved Domains (2) summary
    cd06946
    Location:228 → 447
    NR_LBD_ERR; The ligand binding domain of estrogen receptor-related nuclear receptors
    cd07170
    Location:114 → 209
    NR_DBD_ERR; DNA-binding domain of estrogen related receptors (ERR) is composed of two C4-type zinc fingers
Nucleotide Protein
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